RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 RFLNBQ8N5W9 214 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.6□□□□□ -0.39
IRF3-223ENST00000599223 SMYD1Q8NB12 490 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 IL17RDQ8NFM7 739 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 OR6S1Q8NH40 331 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 YIPF5Q969M3 257 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 LRR1Q96L50 414 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 FOXB1Q99853 325 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 HOPXQ9BPY8 73 aaPredicted RBP12.6□□□□□ -0.39
IRF3-223ENST00000599223 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 REV1Q9UBZ9 1251 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 NOX1Q9Y5S8 564 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 FAM157AC9JC47 383 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 TCF21O43680 179 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 LYPD3O95274 346 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 OPN1SWP03999 348 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 THY1P04216 161 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 GPX2P18283 190 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 COL8A2P25067 703 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 GLRXP35754 106 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 SRP14P37108 136 aaKnown RBP12.59□□□□□ -0.39
IRF3-223ENST00000599223 DVL1P1P54792 670 aaPredicted RBP12.59□□□□□ -0.39
IRF3-223ENST00000599223 BIDP55957 195 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 PCBP3P57721 371 aaKnown RBP12.59□□□□□ -0.39
IRF3-223ENST00000599223 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
IRF3-223ENST00000599223 NFYCQ13952 458 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 RAB39AQ14964 217 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 ARPINQ7Z6K5 226 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 MEX3DQ86XN8 651 aaKnown RBP12.59□□□□□ -0.39
IRF3-223ENST00000599223 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 PTOV1Q86YD1 416 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 C10orf53Q8N6V4 93 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 GPR32P1Q8NGA4 272 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 OR6N1Q8NGY5 312 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 STMN2Q93045 179 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 EPYCQ99645 322 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 TMEM43Q9BTV4 400 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 RACGAP1Q9H0H5 632 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 RASSF4Q9H2L5 321 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 LPAR2Q9HBW0 351 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 POFUT2Q9Y2G5 429 aa12.59□□□□□ -0.39
IRF3-223ENST00000599223 C11orf98E9PRG8 122 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 RP2O75695 350 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 MFN2O95140 757 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 NAT2P11245 290 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 AHCYP23526 432 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 CSNK1A1P48729 337 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 EVX1P49640 407 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 PSME3P61289 254 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 SELPLGQ14242 412 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
IRF3-223ENST00000599223 ALKBH6Q3KRA9 238 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
IRF3-223ENST00000599223 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 LIPNQ5VXI9 398 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 DLEU7Q6UYE1 221 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 PXKQ7Z7A4 578 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 ARMC8Q8IUR7 673 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 SKA3Q8IX90 412 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 SEMA6DQ8NFY4 1073 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 TMEM54Q969K7 222 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 TSPAN32Q96QS1 320 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 ARHGDIGQ99819 225 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 SPATA5L1Q9BVQ7 753 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 TMEM27Q9HBJ8 222 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 B3GAT2Q9NPZ5 323 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
IRF3-223ENST00000599223 ADA2Q9NZK5 511 aa12.58□□□□□ -0.4
IRF3-223ENST00000599223 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.58□□□□□ -0.4
IRF3-223ENST00000599223 DYSFO75923 2080 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 VSTM5A8MXK1 200 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 FBP2O00757 339 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 VENTXO95231 258 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 RAB36O95755 333 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 ADORA3P0DMS8 318 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 SAGP10523 405 aaPredicted RBP12.57□□□□□ -0.4
IRF3-223ENST00000599223 PPIBP23284 216 aaKnown RBP12.57□□□□□ -0.4
IRF3-223ENST00000599223 SLC6A2P23975 617 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 ERVS71-1P61550 626 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 RAB1AP62820 205 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 MELKQ14680 651 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 ZNF74Q16587 644 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 DUSP7Q16829 419 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 SPATS1Q496A3 300 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 SAMD4BQ5PRF9 694 aaKnown RBP12.57□□□□□ -0.4
IRF3-223ENST00000599223 LINC00114Q6XXX2 140 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 RANBP3LQ86VV4 465 aaPredicted RBP12.57□□□□□ -0.4
IRF3-223ENST00000599223 RBM45Q8IUH3 476 aaKnown RBP12.57□□□□□ -0.4
IRF3-223ENST00000599223 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 OR6T1Q8NGN1 323 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 OR5J2Q8NH18 312 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 GTF3AQ92664 365 aaKnown RBP12.57□□□□□ -0.4
IRF3-223ENST00000599223 CDRT15Q96T59 188 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 MCHR1Q99705 422 aa12.57□□□□□ -0.4
IRF3-223ENST00000599223 SELENONQ9NZV5 590 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms