RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 EPHX4Q8IUS5 362 aa11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 KIR3DL3Q8N743 410 aa11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 LSMEM1Q8N8F7 131 aa11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 C10orf82Q8WW14 230 aa11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 SLC25A28Q96A46 364 aa11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 TMIGD2Q96BF3 282 aa11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 ZNF317Q96PQ6 595 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 SF3B5Q9BWJ5 86 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-208ENST00000595726 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 BBIP1A8MTZ0 92 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 SERPINB7O75635 380 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 MFN2O95140 757 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 P2RY4P51582 365 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 EGR4Q05215 589 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 MAPRE2Q15555 327 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 KLF17Q5JT82 389 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 C1orf140Q5VVS0 124 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 C6orf89Q6UWU4 347 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 RHOUQ7L0Q8 258 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 JAZF1Q86VZ6 243 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 ARMC8Q8IUR7 673 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 WDFY1Q8IWB7 410 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 KDM8Q8N371 416 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 SYT14Q8NB59 555 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 BHLHE22Q8NFJ8 381 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 IL17RDQ8NFM7 739 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 OR10A6Q8NH74 314 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 STK35Q8TDR2 534 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 RAB39BQ96DA2 213 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 WFDC6Q9BQY6 131 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 C12orf10Q9HB07 376 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 ADPRHL2Q9NX46 363 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 RPS6KB2Q9UBS0 482 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 TESQ9UGI8 421 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 CACNG2Q9Y698 323 aa11.7□□□□□ -0.54
SHKBP1-208ENST00000595726 A0A1B0GWA3 101 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 MRASO14807 208 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 HLA-HP01893 362 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 OPN1SWP03999 348 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 ZNF35P13682 527 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 GLRXP35754 106 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 RAD52P43351 418 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 GZMMP51124 257 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 RGS8P57771 180 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 NCALDP61601 193 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 PIGFQ07326 219 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 CYLC2Q14093 348 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 MMEL1Q495T6 779 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 RABL3Q5HYI8 236 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 NANOGP8Q6NSW7 305 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 SNX32Q86XE0 403 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC30A8Q8IWU4 369 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 SMYD1Q8NB12 490 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 OR8J3Q8NGG0 315 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 PTDSS2Q9BVG9 487 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 TAPBPLQ9BX59 468 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 MMP27Q9H306 513 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 NANOGQ9H9S0 305 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 MOV10Q9HCE1 1003 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 NUP50Q9UKX7 468 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 NOX1Q9Y5S8 564 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 CAPN7Q9Y6W3 813 aa11.69□□□□□ -0.54
SHKBP1-208ENST00000595726 A0A1W2PPW3 197 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 TPST2O60704 377 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 FZD7O75084 574 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 AHSA1O95433 338 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 KNG1P01042 644 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 NPPAP01160 153 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 GATA3P23771 443 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 SH3BGRP55822 239 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 KRTAP10-3P60369 221 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 DUSP7Q16829 419 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 VMACQ2NL98 169 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 ALG10BQ5I7T1 473 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 GKAP1Q5VSY0 366 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 SPATC1Q76KD6 591 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 GPR32P1Q8NGA4 272 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 DNAJA4Q8WW22 397 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 KTI12Q96EK9 354 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 TSPAN32Q96QS1 320 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 GPA33Q99795 319 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 ARHGDIGQ99819 225 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 LINC00470Q9BZP3 86 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 EVA1AQ9H8M9 152 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 ZMAT3Q9HA38 289 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 GPR35Q9HC97 309 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 MMP26Q9NRE1 261 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 B3GNT2Q9NY97 397 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 PLEK2Q9NYT0 353 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC13A4Q9UKG4 626 aa11.68□□□□□ -0.54
SHKBP1-208ENST00000595726 IGKV1D-42A0A075B6H8 117 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 A0A0B4J2E0 115 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 LOC100653049A0A140TA62 436 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 A0A1B0GX12 115 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 M0QX08 132 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms