RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 C20orf141Q9NUB4 165 aa10.86□□□□□ -0.67
UPF1-203ENST00000594504 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
UPF1-203ENST00000594504 A0A087WUU8 490 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 A0A096LPE4 126 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 A0A1W2PPZ6 126 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 TCRBV5S2A0A599 114 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 SLC35F4A4IF30 521 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 PIP5K1CO60331 668 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 DNAJC8O75937 253 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 FUT1P19526 365 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 USF1P22415 310 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 AHCYP23526 432 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 SMIM11AP58511 58 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 ZP4Q12836 540 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 TRAP1Q12931 704 aaKnown RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 GGTLC2Q14390 218 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 CARTPTQ16568 116 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 PGM2L1Q6PCE3 622 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 VHLLQ6RSH7 139 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 ZNF730Q6ZMV8 503 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 MBOAT2Q6ZWT7 520 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 ABHD12BQ7Z5M8 362 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 ZDHHC21Q8IVQ6 265 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 NRMQ8IXM6 262 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 SLC7A13Q8TCU3 470 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 TMEM158Q8WZ71 300 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 BCL2L2Q92843 193 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 BPIFA2Q96DR5 249 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 DHRS1Q96LJ7 313 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 LRGUKQ96M69 825 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 FOXN4Q96NZ1 517 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 ALKBH3Q96Q83 286 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 ZNF347Q96SE7 839 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 VRK1Q99986 396 aaPredicted RBP10.85□□□□□ -0.67
UPF1-203ENST00000594504 TRIM15Q9C019 465 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 TAS2R5Q9NYW4 299 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 JMJD1CQ15652 2540 aa10.85□□□□□ -0.67
UPF1-203ENST00000594504 ARFGEF3Q5TH69 2177 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 VWC2LB2RUY7 222 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 C11orf98E9PRG8 122 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 BLOC1S5-TXNDC5H3BN57 136 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 ACOT8O14734 319 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 RNF13O43567 381 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 LMX1BO60663 402 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 SLC43A1O75387 559 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 ZNF432O94892 652 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 DIRAS1O95057 198 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 BMP4P12644 408 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 IFI30P13284 250 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 HLA-DOBP13765 273 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 CALCRP30988 508 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 PDLIM4P50479 330 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 PRKCDQ05655 676 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 FGD3Q5JSP0 725 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 ANKRD16Q6P6B7 361 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 NHLRC1Q6VVB1 395 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 RRM2BQ7LG56 351 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 PIWIL3Q7Z3Z3 882 aaKnown RBP10.84□□□□□ -0.67
UPF1-203ENST00000594504 CDK20Q8IZL9 346 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 BOD1Q96IK1 185 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 SLC38A2Q96QD8 506 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 SEPHS2Q99611 448 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 LINC00470Q9BZP3 86 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 SHARPINQ9H0F6 387 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 NELFAQ9H3P2 528 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 MAGIXQ9H6Y5 334 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 CHODLQ9H9P2 273 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 CDC42EP3Q9UKI2 254 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 ZANQ9Y493 2812 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
UPF1-203ENST00000594504 IGHV4-61A0A0C4DH41 118 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 AQP12BA6NM10 295 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 ZNF587BE7ETH6 402 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 GSC2O15499 205 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 SERPINI2O75830 405 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 GADD45GO95257 159 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 CELA3BP08861 270 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 TSPAN19P0C672 248 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 SAGP10523 405 aaPredicted RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 IGFBP5P24593 272 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 SERPINF1P36955 418 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 NR4A2P43354 598 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 MAGEA2P43356 314 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 SPIBQ01892 262 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 NAAAQ02083 359 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 RPL18Q07020 188 aaKnown RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 ADIPOQQ15848 244 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 ANKDD1AQ495B1 522 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 TBPL2Q6SJ96 375 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 MYPOPQ86VE0 399 aaPredicted RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 AQP12AQ8IXF9 295 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 TMEM123Q8N131 208 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms