RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SWI5Q1ZZU3 235 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 MST1LQ2TV78 715 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 ALG10Q5BKT4 473 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 ZNF730Q6ZMV8 503 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 DNM1P46Q6ZS02 220 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 SLC22A24Q8N4F4 322 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 NUP37Q8NFH4 326 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 IL17RDQ8NFM7 739 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 MCHR2Q969V1 340 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 ZNF347Q96SE7 839 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 CDRT15Q96T59 188 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 TXNIPQ9H3M7 391 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 TMEM38BQ9NVV0 291 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 NDE1Q9NXR1 346 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 STX18Q9P2W9 335 aaKnown RBP23.62■■□□□ 1.37
SMAD4-213ENST00000591914 MAGEL2Q9UJ55 1249 aa23.62■■□□□ 1.37
SMAD4-213ENST00000591914 A0A1W2PRQ8 180 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 FAM107AO95990 144 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 ZNF14P17017 642 aaPredicted RBP23.61■■□□□ 1.37
SMAD4-213ENST00000591914 ZNF133P52736 654 aaPredicted RBP23.61■■□□□ 1.37
SMAD4-213ENST00000591914 PIGFQ07326 219 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 DGCR6Q14129 220 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 KRT72Q14CN4 511 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 ANKDD1AQ495B1 522 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 TBPL2Q6SJ96 375 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 C16orf89Q6UX73 402 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 MEX3DQ86XN8 651 aaKnown RBP23.61■■□□□ 1.37
SMAD4-213ENST00000591914 SKA3Q8IX90 412 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 FITM2Q8N6M3 262 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 SYT14Q8NB59 555 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 SLC7A13Q8TCU3 470 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 ZANQ9Y493 2812 aa23.61■■□□□ 1.37
SMAD4-213ENST00000591914 EFCAB9A8MZ26 197 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 ENTPD5O75356 428 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 PDE5AO76074 875 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 UBL3O95164 117 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 IGHMP01871 453 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 OR8G3PP0DMU2 310 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 BMP4P12644 408 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 RHCEP18577 417 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 SLC9A3P48764 834 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 RAB1AP62820 205 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 VLDLRP98155 873 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 TAF11Q15544 211 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 ADIPOQQ15848 244 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 SPATS1Q496A3 300 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 NRN1LQ496H8 165 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 GKAP1Q5VSY0 366 aaPredicted RBP23.6■■□□□ 1.37
SMAD4-213ENST00000591914 OAFQ86UD1 273 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 LRRC75AQ8NAA5 344 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 MS4A3Q96HJ5 214 aa23.6■■□□□ 1.37
SMAD4-213ENST00000591914 FAM32AQ9Y421 112 aaKnown RBP23.6■■□□□ 1.37
SMAD4-213ENST00000591914 NIPBLQ6KC79 2804 aaeCLIP23.59■■□□□ 1.372e-7■□□□□ 8.6
SMAD4-213ENST00000591914 TRAV27A0A087WT01 109 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 FAM171A2A8MVW0 826 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 SMAD7O15105 426 aaKnown RBP23.59■■□□□ 1.37
SMAD4-213ENST00000591914 H1F0P07305 194 aaKnown RBP23.59■■□□□ 1.37
SMAD4-213ENST00000591914 SERPINF1P36955 418 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 GIPRP48546 466 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 MNAT1P51948 309 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 MYBPC1Q00872 1141 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 C10orf128Q5T292 105 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 TMPRSS11FQ6ZWK6 438 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 CDK20Q8IZL9 346 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 DEFB107AQ8IZN7 70 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 OR51A7Q8NH64 312 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 NMD3Q96D46 503 aaKnown RBP23.59■■□□□ 1.37
SMAD4-213ENST00000591914 FBXO17Q96EF6 278 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 ZNF442Q9H7R0 627 aa23.59■■□□□ 1.37
SMAD4-213ENST00000591914 CDC42EP2O14613 210 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 ARPC2O15144 300 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 SEMG1P04279 462 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 MSX2P35548 267 aaPredicted RBP23.58■■□□□ 1.37
SMAD4-213ENST00000591914 PTDSS1P48651 473 aaKnown RBP23.58■■□□□ 1.37
SMAD4-213ENST00000591914 RPL27P61353 136 aaKnown RBP23.58■■□□□ 1.37
SMAD4-213ENST00000591914 RAB35Q15286 201 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 IQCCQ4KMZ1 466 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 PODNL1Q6PEZ8 512 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 CLEC9AQ6UXN8 241 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 OR13C2Q8NGS9 318 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 FGFBP3Q8TAT2 258 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 HDAC2Q92769 488 aaKnown RBP23.58■■□□□ 1.37
SMAD4-213ENST00000591914 PYURFQ96I23 114 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 DHRS1Q96LJ7 313 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 TNFRSF13CQ96RJ3 184 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 KCNK17Q96T54 332 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 SH3GL3Q99963 347 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 SMURF2Q9HAU4 748 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 FBXL3Q9UKT7 428 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 PMF1-BGLAPU3KQ54 211 aa23.58■■□□□ 1.37
SMAD4-213ENST00000591914 ARFGEF3Q5TH69 2177 aa23.58■■□□□ 1.36
SMAD4-213ENST00000591914 hCG_2039718K7EN88 272 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 SSX4O60224 188 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 FARS2O95363 451 aaKnown RBP23.57■■□□□ 1.36
SMAD4-213ENST00000591914 RAB36O95755 333 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 OR4A8P0C604 315 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 GPR4P46093 362 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 ZNF84P51523 738 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 CTXN1P60606 82 aa23.57■■□□□ 1.36
SMAD4-213ENST00000591914 MXRA7P84157 204 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms