RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CHN2P52757 468 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 UGT2B15P54855 530 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 MYBPC1Q00872 1141 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 GALK2Q01415 458 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 CYLC2Q14093 348 aaPredicted RBP12.33□□□□□ -0.44
VMP1-206ENST00000587945 CCNIQ14094 377 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 FXNQ16595 210 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 CR1LQ2VPA4 569 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 METTL21CQ5VZV1 264 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 PIWIL3Q7Z3Z3 882 aaKnown RBP12.33□□□□□ -0.44
VMP1-206ENST00000587945 NANOGNBQ7Z5D8 188 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 CALHM3Q86XJ0 350 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 NKAIN4Q8IVV8 208 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
VMP1-206ENST00000587945 MPP4Q96JB8 637 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 ZNF347Q96SE7 839 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 DENND2DQ9H6A0 471 aaPredicted RBP12.33□□□□□ -0.44
VMP1-206ENST00000587945 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 DUSP13Q9UII6 198 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 SH3GLB1Q9Y371 365 aa12.33□□□□□ -0.44
VMP1-206ENST00000587945 FXYD1O00168 92 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 BCL10O95999 233 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 HPXP02790 462 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 SERPINA5P05154 406 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 F13BP05160 661 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 COL8A2P25067 703 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 TAS2R41P59536 307 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
VMP1-206ENST00000587945 PIN1Q13526 163 aaPredicted RBP12.32□□□□□ -0.44
VMP1-206ENST00000587945 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 ELFN2Q5R3F8 820 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 REP15Q6BDI9 236 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 OR4K5Q8NGD3 323 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 MCHR2Q969V1 340 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 LRRC58Q96CX6 371 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 ECSITQ9BQ95 431 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 SIKE1Q9BRV8 207 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 OR51B6Q9H340 312 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 RNF121Q9H920 327 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 C20orf141Q9NUB4 165 aa12.32□□□□□ -0.44
VMP1-206ENST00000587945 OR7A10O76100 309 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 IGHG1P01857 330 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 MT-ND1P03886 318 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 FAM157BP0CG42 384 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 NAT2P11245 290 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 H2AFXP16104 143 aaPredicted RBP12.31□□□□□ -0.44
VMP1-206ENST00000587945 FUT1P19526 365 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 HNF1AP20823 631 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 AQP2P41181 271 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 OR1E2P47887 323 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 CLRN1P58418 232 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 RPS23P62266 143 aaKnown RBP12.31□□□□□ -0.44
VMP1-206ENST00000587945 MMEL1Q495T6 779 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 SLC30A7Q8NEW0 376 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 MOSPD2Q8NHP6 518 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 RASSF5Q8WWW0 418 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 SGTBQ96EQ0 304 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 SLC7A8Q9UHI5 535 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 RIMS3Q9UJD0 308 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 FBXL3Q9UKT7 428 aa12.31□□□□□ -0.44
VMP1-206ENST00000587945 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 A0A1W2PPW3 197 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 MCIDASD6RGH6 385 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 MRASO14807 208 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
VMP1-206ENST00000587945 KRT34O76011 436 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 NCR1O76036 304 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 FARS2O95363 451 aaKnown RBP12.3□□□□□ -0.44
VMP1-206ENST00000587945 CLPTM1O96005 669 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 LSP1P33241 339 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 ERVS71-1P61550 626 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 KLF10Q13118 480 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 TMEM53Q6P2H8 277 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 SLC16A14Q7RTX9 510 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 LRRC18Q8N456 261 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 LINC01356Q8N9X3 169 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 OR8J3Q8NGG0 315 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 C10orf82Q8WW14 230 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 TMEM239Q8WW34 195 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 ASB10Q8WXI3 467 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 HPS1Q92902 700 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 YIPF5Q969M3 257 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 ZNF583Q96ND8 569 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 TSPAN32Q96QS1 320 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 SH3GL1Q99961 368 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 MRPL13Q9BYD1 178 aaKnown RBP12.3□□□□□ -0.44
VMP1-206ENST00000587945 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 SAR1AQ9NR31 198 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 ARGLU1Q9NWB6 273 aaPredicted RBP12.3□□□□□ -0.44
VMP1-206ENST00000587945 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms