RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 OR6M1Q8NGM8 313 aa2□□□□□ -2.09
VAPA-208ENST00000584796 SPPL2AQ8TCT8 520 aa2□□□□□ -2.09
VAPA-208ENST00000584796 NAT14Q8WUY8 206 aa2□□□□□ -2.09
VAPA-208ENST00000584796 PHYHIPQ92561 330 aa2□□□□□ -2.09
VAPA-208ENST00000584796 PIK3R3Q92569 461 aa2□□□□□ -2.09
VAPA-208ENST00000584796 HIST1H2ACQ93077 130 aa2□□□□□ -2.09
VAPA-208ENST00000584796 MCHR2Q969V1 340 aa2□□□□□ -2.09
VAPA-208ENST00000584796 TMEM159Q96B96 161 aa2□□□□□ -2.09
VAPA-208ENST00000584796 C9orf72Q96LT7 481 aa2□□□□□ -2.09
VAPA-208ENST00000584796 RPRD1AQ96P16 312 aaPredicted RBP2□□□□□ -2.09
VAPA-208ENST00000584796 VPS35Q96QK1 796 aa2□□□□□ -2.09
VAPA-208ENST00000584796 RHOXF2Q9BQY4 288 aa2□□□□□ -2.09
VAPA-208ENST00000584796 ALKBH7Q9BT30 221 aaPredicted RBP2□□□□□ -2.09
VAPA-208ENST00000584796 UCK2Q9BZX2 261 aa2□□□□□ -2.09
VAPA-208ENST00000584796 EXO5Q9H790 373 aa2□□□□□ -2.09
VAPA-208ENST00000584796 METTL7AQ9H8H3 244 aa2□□□□□ -2.09
VAPA-208ENST00000584796 RNF121Q9H920 327 aa2□□□□□ -2.09
VAPA-208ENST00000584796 FN3KRPQ9HA64 309 aa2□□□□□ -2.09
VAPA-208ENST00000584796 LHX9Q9NQ69 397 aa2□□□□□ -2.09
VAPA-208ENST00000584796 FBXO8Q9NRD0 319 aa2□□□□□ -2.09
VAPA-208ENST00000584796 ABCC13Q9NSE7 274 aa2□□□□□ -2.09
VAPA-208ENST00000584796 DDX28Q9NUL7 540 aaKnown RBP2□□□□□ -2.09
VAPA-208ENST00000584796 ETNK2Q9NVF9 386 aa2□□□□□ -2.09
VAPA-208ENST00000584796 CLEC5AQ9NY25 188 aa2□□□□□ -2.09
VAPA-208ENST00000584796 RDH8Q9NYR8 311 aa2□□□□□ -2.09
VAPA-208ENST00000584796 RNF14Q9UBS8 474 aa2□□□□□ -2.09
VAPA-208ENST00000584796 CD84Q9UIB8 345 aa2□□□□□ -2.09
VAPA-208ENST00000584796 PSORS1C1Q9UIG5 152 aa2□□□□□ -2.09
VAPA-208ENST00000584796 AP4B1Q9Y6B7 739 aa2□□□□□ -2.09
VAPA-208ENST00000584796 HYDINQ4G0P3 5121 aa2□□□□□ -2.09
VAPA-208ENST00000584796 COL7A1Q02388 2944 aa2□□□□□ -2.09
VAPA-208ENST00000584796 ALPK2Q86TB3 2170 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 A0A075B6Q4 140 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 TRGV8A0A0C4DH27 118 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 HEATR9A2RTY3 570 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 CCDC162PA2VCL2 907 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 HELTA6NFD8 242 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 TLCD2A6NGC4 264 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 RNF212BA8MTL3 300 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ARHGEF33A8MVX0 844 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 E5RGE8 158 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 M0QYV0 167 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 SLC1A7O00341 560 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 HAT1O14929 419 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ZNF208O43345 1280 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 DPM1O60762 260 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 NDUFA7O95182 113 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ANP32DO95626 131 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 EPOP01588 193 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 PLEKP08567 350 aaPredicted RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 ZCCHC18P0CG32 403 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 PNMA6AP0CW24 399 aaPredicted RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 F3P13726 295 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ZNF44P15621 663 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 NCF2P19878 526 aaPredicted RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 AADACP22760 399 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 SRD5A2P31213 254 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ACTR1BP42025 376 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 PTGFRP43088 359 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 CA7P43166 264 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 RPL34P49207 117 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 ETV1P50549 477 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 PPT1P50897 306 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 EFNA3P52797 238 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 NDUFV3P56181 108 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 CLDN17P56750 224 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ERVK-16P61578 105 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 UBE2IP63279 158 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 NUCB2P80303 420 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 TFF3Q07654 80 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 KIAA0141Q14154 515 aaPredicted RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 SELPLGQ14242 412 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 EXOSC7Q15024 291 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 CYTH1Q15438 398 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 SPHARQ15513 63 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 SSX2Q16385 188 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 HADHQ16836 314 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 EXOC3L2Q2M3D2 409 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 UTF1Q5T230 341 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 C9orf66Q5T8R8 295 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ARMC12Q5T9G4 340 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 CENPUQ71F23 418 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 HSD11B1LQ7Z5J1 315 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 CPEB2Q7Z5Q1 589 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 PSTKQ8IV42 348 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 UBQLNLQ8IYU4 475 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 UBE2J2Q8N2K1 259 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 ARHGAP18Q8N392 663 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 DCAF4L2Q8NA75 395 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 OR8J1Q8NGP2 316 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 TRMT10AQ8TBZ6 339 aaKnown RBP1.99□□□□□ -2.09
VAPA-208ENST00000584796 CXorf40AQ8TE69 158 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 OSTF1Q92882 214 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 C11orf52Q96A22 123 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 TMEM45BQ96B21 275 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 BTN2A3PQ96KV6 586 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 TGM7Q96PF1 710 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 RAB40CQ96S21 281 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 S1PR3Q99500 378 aa1.99□□□□□ -2.09
VAPA-208ENST00000584796 NDNQ99608 321 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms