RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TAS2R19P59542 299 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 GTF2BQ00403 316 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 TGFBR3Q03167 851 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 GABPB1Q06547 395 aaPredicted RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 RIPPLY1Q0D2K3 151 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ATXN7L3Q14CW9 347 aaPredicted RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 PSG5Q15238 335 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 C5orf47Q569G3 176 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 PPM1LQ5SGD2 360 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ZNF836Q6ZNA1 936 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 C6orf223Q8N319 242 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 RNF148Q8N7C7 305 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 C15orf54Q8N8G6 183 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 CYB561D1Q8N8Q1 229 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ZNF709Q8N972 641 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 SPC24Q8NBT2 197 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 TMEM161BQ8NDZ6 487 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ITFG1Q8TB96 612 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 GIPC3Q8TF64 312 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 C2orf15Q8WU43 125 aaKnown RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 FCGR1BQ92637 280 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 SMARCD2Q92925 531 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 SPATA16Q9BXB7 569 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 OR11A1Q9GZK7 315 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ASB7Q9H672 318 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ZNF385DQ9H6B1 395 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 CALHM2Q9HA72 323 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ZFP14Q9HCL3 533 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ANO10Q9NW15 660 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ANAPC7Q9UJX3 599 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 HES2Q9Y543 173 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 MAD1L1Q9Y6D9 718 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ZFHX4Q86UP3 3567 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 SPTBN2O15020 2390 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ASPMQ8IZT6 3477 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ATG2BQ96BY7 2078 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 LAMA1P25391 3075 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 MYH10P35580 1976 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 FAM208BQ5VWN6 2430 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 KNTC1P50748 2209 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 MYOFQ9NZM1 2061 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 THADAQ6YHU6 1953 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 PCDH15Q96QU1 1955 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 USP24Q9UPU5 2620 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 PLXNB3Q9ULL4 1909 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 H0YCG3 227 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 CCL16O15467 120 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 CHMP2AO43633 222 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 KERAO60938 352 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 B3GAT3O94766 335 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 DCNP07585 359 aaKnown RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 CLTAP09496 248 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 ICAM2P13598 275 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 CSRP1P21291 193 aaKnown RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 CALB2P22676 271 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 MAGEA5P43359 124 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 CXCL12P48061 93 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 SELENOTP62341 195 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 HMGN5P82970 282 aaKnown RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 CBX3Q13185 183 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 PLD1Q13393 1074 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 ARL6IP1Q15041 203 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 FAM78AQ5JUQ0 283 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 LIN9Q5TKA1 542 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 Q5W150 140 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 CENPPQ6IPU0 288 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 GET4Q7L5D6 327 aaPredicted RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 TMEM150AQ86TG1 271 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 ZBTB8OSQ8IWT0 167 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 SVOPLQ8N434 492 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 MINDY2Q8NBR6 621 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 NPBQ8NG41 125 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 OR51S1Q8NGJ8 323 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 FAM3CQ92520 227 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 NDRG1Q92597 394 aaKnown RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 PINX1Q96BK5 328 aaKnown RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 CPB2Q96IY4 423 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 IFT74Q96LB3 600 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 PKMYT1Q99640 499 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 ZNF2Q9BSG1 426 aaPredicted RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 CCDC94Q9BW85 323 aaPredicted RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 DUSP16Q9BY84 665 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 GPR61Q9BZJ8 451 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 XPO4Q9C0E2 1151 aaKnown RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 CXCL16Q9H2A7 254 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 IFI27L2Q9H2X8 130 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 DMAP1Q9NPF5 467 aaPredicted RBP2.02□□□□□ -2.09
COPS3-217ENST00000583160 ZDHHC4Q9NPG8 344 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 HEBP1Q9NRV9 189 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 IL37Q9NZH6 218 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 OPN4Q9UHM6 478 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 ATP6V1HQ9UI12 483 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 ODF2LQ9ULJ1 636 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 CLCA3PQ9Y6N3 262 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 WDFY3Q8IZQ1 3526 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 SDK1Q7Z5N4 2213 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 SPEGQ15772 3267 aa2.02□□□□□ -2.09
COPS3-217ENST00000583160 PTPRBP23467 1997 aa2.01□□□□□ -2.09
COPS3-217ENST00000583160 WDR87Q6ZQQ6 2873 aa2.01□□□□□ -2.09
COPS3-217ENST00000583160 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms