RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	OR52E4	Q8NGH9	312 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	OR4L1	Q8NH43	312 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM45A	Q8TCE6	357 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	TMBIM1	Q969X1	311 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	CCDC126	Q96EE4	140 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	DUS3L	Q96G46	650 aa	Known RBP	3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	WDFY2	Q96P53	400 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	SERPINI1	Q99574	410 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC29A1	Q99808	456 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	MAPKAP1	Q9BPZ7	522 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	ITPA	Q9BY32	194 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM192A	Q9GZU8	254 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	SIRPD	Q9H106	197 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	NANOG	Q9H9S0	305 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	GCM1	Q9NP62	436 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	CATSPERZ	Q9NTU4	200 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	DECR2	Q9NUI1	292 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	CMTM6	Q9NX76	183 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	ADA2	Q9NZK5	511 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	CCDC167	Q9P0B6	97 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	TMEM181	Q9P2C4	612 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF225	Q9UK10	706 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772	RIMKLB	Q9ULI2	386 aa		3.93	□□□□□ -1.78
MSI2-216	ENST00000582772		A0A1W2PPW3	197 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	GJE1	A6NN92	205 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF716	A6NP11	495 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SUPT3H	B4E1H0	165 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SEC14L6	B5MCN3	397 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	AP4M1	O00189	453 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	NR5A2	O00482	541 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	DLGAP1	O14490	977 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SOCS2	O14508	198 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	AZIN1	O14977	448 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	NDUFB5	O43674	189 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	FADS1	O60427	444 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SUPT3H	O75486	399 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	RBMXL2	O75526	392 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	FGF4	P08620	206 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SBK2	P0C263	348 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	LINC00032	P0C843	101 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ETS2	P15036	469 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	CBR1	P16152	277 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	MAK	P20794	623 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	S1PR1	P21453	382 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	RPS3	P23396	243 aa	Known RBP eCLIP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC7A1	P30825	629 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	MDH2	P40926	338 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	PPIC	P45877	212 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	HTR6	P50406	440 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC7A2	P52569	658 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TRAP1	Q12931	704 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	MED21	Q13503	144 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	APOF	Q13790	326 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SELPLG	Q14242	412 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TRIM25	Q14258	630 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ZMYND11	Q15326	602 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	PFKFB4	Q16877	469 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	NKPD1	Q17RQ9	610 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	C18orf21	Q32NC0	220 aa	Predicted RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	LGALS9B	Q3B8N2	356 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TMEM177	Q53S58	311 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	XKR7	Q5GH72	579 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	MTX3	Q5HYI7	312 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM27D1	Q5T7N8	215 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	KLC3	Q6P597	504 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	CYP2R1	Q6VVX0	501 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	PTOV1	Q86YD1	416 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	EPHX4	Q8IUS5	362 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	EGFL6	Q8IUX8	553 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC15A3	Q8IY34	581 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SCAI	Q8N9R8	606 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ICA1L	Q8NDH6	482 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	OR4X2	Q8NGF9	303 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	OR5M8	Q8NGP6	311 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	OR2T11	Q8NH01	316 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TRPC4AP	Q8TEL6	797 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	DOK4	Q8TEW6	326 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SNX33	Q8WV41	574 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TWIST2	Q8WVJ9	160 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ESAM	Q96AP7	390 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ASB9	Q96DX5	294 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM46A	Q96IP4	442 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	PLEKHA8	Q96JA3	519 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TEX37	Q96LM6	180 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	LRGUK	Q96M69	825 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	RNF145	Q96MT1	663 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	BIRC8	Q96P09	236 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	BBS4	Q96RK4	519 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ADO	Q96SZ5	270 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	NPAS1	Q99742	590 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	C1QTNF3	Q9BXJ4	246 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	CDCA4	Q9BXL8	241 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	MRPL1	Q9BYD6	325 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	DERL2	Q9GZP9	239 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM234A	Q9H0X4	552 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	RBM38	Q9H0Z9	239 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	SEMA6A	Q9H2E6	1030 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	VCX3B	Q9H321	246 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	RPF2	Q9H7B2	306 aa	Known RBP	3.92	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms