RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 C7orf26Q96N11 449 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ALKBH3Q96Q83 286 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 CCDC28BQ9BUN5 200 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 TRAF4Q9BUZ4 470 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 PTDSS2Q9BVG9 487 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 POTEKPQ9BYX7 375 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 TRIM2Q9C040 744 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ZNF385DQ9H6B1 395 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 MTHFD2LQ9H903 347 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 NOX3Q9HBY0 568 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 A4GALTQ9NPC4 353 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 TIGARQ9NQ88 270 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 EXOSC3Q9NQT5 275 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 POLE3Q9NRF9 147 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GLRX2Q9NS18 164 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ZNF446Q9NWS9 450 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PAQR5Q9NXK6 330 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 LIPT1Q9Y234 373 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 SLC25A15Q9Y619 301 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 MALRD1Q5VYJ5 2156 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 IGHV4-30-2A0A087WSY4 118 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 A0A0G2JND7 137 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 A0A1W2PP18 115 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 OR5H1A6NKK0 313 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 AQP7P3A6NL99 342 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CPSF4LA6NMK7 179 aaKnown RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 ZNF724A8MTY0 619 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 C5orf58C9J3I9 102 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 ATP6V1G2-DDX39BF2Z307 99 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SLCO1B7G3V0H7 640 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 KPNA4O00629 521 aaPredicted RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 FBP2O00757 339 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SSX4O60224 188 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 GPRIN2O60269 458 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 EDF1O60869 148 aaKnown RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 NPIPB7O75200 414 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SLC43A1O75387 559 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 MRPL33O75394 65 aaKnown RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 SERPINI2O75830 405 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SOX30O94993 753 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 GOSR1O95249 250 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 LYPD3O95274 346 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 BGLAPP02818 100 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 THY1P04216 161 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 IL6P05231 212 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 HEXAP06865 529 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 GUSBP08236 651 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PATE4P0C8F1 98 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 ZCCHC18P0CG32 403 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PNMTP11086 282 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 GGT1P19440 569 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 GRPRP30550 384 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CALCRP30988 508 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 RBMXP38159 391 aaKnown RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 MAGEA8P43361 318 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PCYT1AP49585 367 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CRYBA2P53672 197 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SLC16A1P53985 500 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CRISP3P54108 245 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CLDN17P56750 224 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 STX1BP61266 288 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CDK6Q00534 326 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 LRRC74AQ0VAA2 488 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 KLF9Q13886 244 aaPredicted RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 SCARB2Q14108 478 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SQLEQ14534 574 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CLEC12BQ2HXU8 276 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 RUNDC3AQ59EK9 446 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 MTX3Q5HYI7 312 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 LRIF1Q5T3J3 769 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 RNF220Q5VTB9 566 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PRAMEF8Q5VWM4 474 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PRAMEF7Q5VXH5 474 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SHEQ5VZ18 495 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 AP1ARQ63HQ0 302 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 ZNF626Q68DY1 528 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 WBP2NLQ6ICG8 309 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 NIPAL3Q6P499 406 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PAQR6Q6TCH4 344 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 MSANTD1Q6ZTZ1 278 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CREB3L2Q70SY1 520 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 AAED1Q7RTV5 226 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CROCCP2Q86T23 111 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 LRRC17Q8N6Y2 441 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 TRIML2Q8N7C3 387 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 ZNF611Q8N823 705 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SEMA6DQ8NFY4 1073 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 BBS10Q8TAM1 723 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PIGXQ8TBF5 258 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 SMAP2Q8WU79 429 aaPredicted RBP3.45□□□□□ -1.86
DDX42-211ENST00000580108 DYDC1Q8WWB3 177 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 CKAP2Q8WWK9 683 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 HSD17B8Q92506 261 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 PIGTQ969N2 578 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 TAAR8Q969N4 342 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 TAMM41Q96BW9 452 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 DDIT4LQ96D03 193 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 ZHX1-C8orf76Q96EF9 292 aa3.45□□□□□ -1.86
DDX42-211ENST00000580108 TXNDC15Q96J42 360 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms