RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SPICQ8N5J4 248 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 TRIML2Q8N7C3 387 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR1J1Q8NGS3 322 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 GEMIN6Q8WXD5 167 aaKnown RBP13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 PANX1Q96RD7 426 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 PATZ1Q9HBE1 687 aaKnown RBP13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 OR5V1Q9UGF6 321 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 CHST2Q9Y4C5 530 aa13.71□□□□□ -0.21
CTDNEP1-211ENST00000575783 TRAV36DV7A0A075B6V5 113 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 A0A087WUJ7 227 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 TM9SF1O15321 606 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 PIN1P1O15428 100 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 IGHV2-70P01814 119 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 CCNOP22674 350 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 AHCYP23526 432 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 S100A3P33764 101 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 TXNL4AP83876 142 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 HLXQ14774 488 aaPredicted RBP13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 SPRNQ5BIV9 151 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 RPS26P11Q5JNZ5 115 aaPredicted RBP13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 RNF220Q5VTB9 566 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM53Q6P2H8 277 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 Q6ZPA2 131 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 C17orf53Q8N3J3 647 aaPredicted RBP13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 ADPRHL1Q8NDY3 354 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 OR1J2Q8NGS2 313 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 TESCQ96BS2 214 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 CCDC115Q96NT0 180 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC30A2Q9BRI3 323 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 SPATA9Q9BWV2 254 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 LRMDAQ9H2I8 198 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 AKTIPQ9H8T0 292 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 MARCH7Q9H992 704 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 CACYBPQ9HB71 228 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 RNF114Q9Y508 228 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 GPR45Q9Y5Y3 372 aa13.7□□□□□ -0.22
CTDNEP1-211ENST00000575783 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 SRRM5B3KS81 715 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 FZD7O75084 574 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 NDUFA7O95182 113 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 PLATP00750 562 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 BCHEP06276 602 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 CDKN2CP42773 168 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 MMP15P51511 669 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 ESCO2Q56NI9 601 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 THEM4Q5T1C6 240 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 NHLRC1Q6VVB1 395 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 BRD3OSQ6XYD6 125 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 WDR88Q6ZMY6 472 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 OR10S1Q8NGN2 331 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 CHIAQ9BZP6 476 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 TCF7L1Q9HCS4 588 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 P2RX2Q9UBL9 471 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 BTNL2Q9UIR0 455 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 TRIM33Q9UPN9 1127 aa13.69□□□□□ -0.22
CTDNEP1-211ENST00000575783 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 IQCMA0A1B0GVH7 501 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 ZSCAN5BA6NJL1 495 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 G3V4G9 280 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 MFN2O95140 757 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 FARS2O95363 451 aaKnown RBP13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 SNAP29O95721 258 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 PTHP01270 115 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 SHBGP04278 402 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 MPV17P39210 176 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 CRISP3P54108 245 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 BIDP55957 195 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 NME5P56597 212 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 PLP2Q04941 152 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 PUDPQ08623 228 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 ZNF718Q3SXZ3 478 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 C5orf46Q6UWT4 87 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 C10orf53Q8N6V4 93 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 OR4K5Q8NGD3 323 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 ASPNQ9BXN1 380 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC6A13Q9NSD5 602 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 GLTPQ9NZD2 209 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 CALML5Q9NZT1 146 aa13.68□□□□□ -0.22
CTDNEP1-211ENST00000575783 C3orf80F5H4A9 247 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 ENTPD5O75356 428 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 TGDSO95455 350 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 ETFAP13804 333 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 APLNRP35414 380 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 CRATP43155 626 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 CLNS1AP54105 237 aaKnown RBP13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 PDCD1Q15116 288 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC36A2Q495M3 483 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM255AQ5JRV8 349 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 BTNL3Q6UXE8 466 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC16A14Q7RTX9 510 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 LRRC28Q86X40 367 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms