RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 HOXB1P14653 301 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 RHCEP18577 417 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 CDH2P19022 906 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 AHCYP23526 432 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 CDKN1AP38936 164 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 CSNK1A1P48729 337 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 PRPS1P60891 318 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 TGFBR3Q03167 851 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 DBPQ10586 325 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 C1DQ13901 141 aaKnown RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 SWI5Q1ZZU3 235 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 FBXW10Q5XX13 1052 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 SLC25A47Q6Q0C1 308 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 C16orf89Q6UX73 402 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 TMEM108Q6UXF1 575 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 ABHD12BQ7Z5M8 362 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 ZER1Q7Z7L7 766 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 SKA3Q8IX90 412 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 RNF113BQ8IZP6 322 aaKnown RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 GPR137CQ8N3F9 429 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 PAQR4Q8N4S7 273 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 C10orf53Q8N6V4 93 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 OR4K5Q8NGD3 323 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 SMAP2Q8WU79 429 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 MCHR2Q969V1 340 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 MUCL1Q96DR8 90 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 PYURFQ96I23 114 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 NSL1Q96IY1 281 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 COX4I2Q96KJ9 171 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 TNFRSF13CQ96RJ3 184 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 BTBD10Q9BSF8 475 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 KATNB1Q9BVA0 655 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 ULBP2Q9BZM5 246 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 TXNIPQ9H3M7 391 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 IL1RAPQ9NPH3 570 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 INIPQ9NRY2 104 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 LYVE1Q9Y5Y7 322 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.52□□□□□ -1.217e-7■□□□□ 8.9
SMG6-216ENST00000575176 TMEM129A0AVI4 362 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 GSTA4O15217 222 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 DHHO43323 396 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 PATE4P0C8F1 98 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 UMPSP11172 480 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ZNF35P13682 527 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 CBR1P16152 277 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ACADSP16219 412 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 TTKP33981 857 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 GSSP48637 474 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 SLC9A3P48764 834 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 MYBPC1Q00872 1141 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ADIPOQQ15848 244 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 NRN1LQ496H8 165 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ALG10Q5BKT4 473 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 HMBOX1Q6NT76 420 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 PRSS57Q6UWY2 283 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 CYP2R1Q6VVX0 501 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ZNF813Q6ZN06 617 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 PTCHD4Q6ZW05 846 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 TRPM8Q7Z2W7 1104 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ADGRG5Q8IZF4 528 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ARHGAP24Q8N264 748 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 BCAS4Q8TDM0 211 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 PIGTQ969N2 578 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ZNF566Q969W8 418 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 ASB9Q96DX5 294 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 PERPQ96FX8 193 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 NSMCE2Q96MF7 247 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 DHRS9Q9BPW9 319 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 FNDC11Q9BVV2 318 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 SMURF2Q9HAU4 748 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 NGBQ9NPG2 151 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 NRIP3Q9NQ35 241 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 NDE1Q9NXR1 346 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 CISD1Q9NZ45 108 aaKnown RBP7.51□□□□□ -1.21
SMG6-216ENST00000575176 GDF2Q9UK05 429 aaPredicted RBP7.51□□□□□ -1.21
SMG6-216ENST00000575176 PRPF19Q9UMS4 504 aaKnown RBP7.51□□□□□ -1.21
SMG6-216ENST00000575176 MOKQ9UQ07 419 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 MGAT4BQ9UQ53 548 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 LAMP3Q9UQV4 416 aa7.51□□□□□ -1.21
SMG6-216ENST00000575176 TRIM64A6NGJ6 449 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 TRIM64BA6NI03 449 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 EFCAB9A8MZ26 197 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 H7C1C5 153 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 H7C417 338 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 DCTN6O00399 190 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 TXNDC12O95881 172 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 BCL10O95999 233 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 WNT11O96014 354 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 IGHG1P01857 330 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 QDPRP09417 244 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 PSKH1P11801 424 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 FPR3P25089 353 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 RRM2P31350 389 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 DAP3P51398 398 aaKnown RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 IDH3GP51553 393 aaPredicted RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 HMGA2P52926 109 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 RPL27P61353 136 aaKnown RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 LCN6P62502 163 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 MRPS34P82930 218 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms