RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PRF1P14222 555 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 SDHAP31040 664 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 CAPZA2P47755 286 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 ACTR3P61158 418 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 CCNIQ14094 377 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 HIST3H3Q16695 136 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 HIKESHIQ53FT3 197 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 PHYHD1Q5SRE7 291 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF770Q6IQ21 691 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZFP1Q6P2D0 407 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 TMEM108Q6UXF1 575 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF813Q6ZN06 617 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 RASSF6Q6ZTQ3 369 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 C22orf34Q6ZV56 151 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF627Q7L945 461 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 MCHR2Q969V1 340 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 UTP4Q969X6 686 aaKnown RBP11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLCO4A1Q96BD0 722 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 NRBF2Q96F24 287 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 DUS3LQ96G46 650 aaKnown RBP11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 PLPPR2Q96GM1 343 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 TSPAN32Q96QS1 320 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 GPA33Q99795 319 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 IFT27Q9BW83 186 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 NRIP3Q9NQ35 241 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 VNN3Q9NY84 501 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 PDP1Q9P0J1 537 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 ADAM18Q9Y3Q7 739 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 A0A096LPE4 126 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 A0A1W2PPZ6 126 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 A0A1W2PR80 420 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 DEFB108AA8MXU0 73 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 CD3EP07766 207 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 OR8G3PP0DMU2 310 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ANXA8P13928 327 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 PTAFRP25105 342 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 RUNX1T1Q06455 604 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 NRN1LQ496H8 165 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 C10orf128Q5T292 105 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 LRFN4Q6PJG9 635 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF620Q6ZNG0 422 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 FAM122BQ7Z309 247 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ADCK1Q86TW2 530 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 JAZF1Q86VZ6 243 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 DEPDC4Q8N2C3 294 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 CLDN22Q8N7P3 220 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 WDR31Q8NA23 367 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF519Q8TB69 540 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 HDAC2Q92769 488 aaKnown RBP11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 GTPBP3Q969Y2 492 aaKnown RBP11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 RADILQ96JH8 1075 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 Q96M85 177 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 ERMAPQ96PL5 475 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 KCNN2Q9H2S1 579 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 DENND2DQ9H6A0 471 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 IL20RAQ9UHF4 553 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 IER3IP1Q9Y5U9 82 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 CDH10Q9Y6N8 788 aa11.18□□□□□ -0.62
TRAPPC1-206ENST00000573989 TEX13CA0A0J9YWL9 993 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 M0R1B8 84 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARPC3O15145 178 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 UBL3O95164 117 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 TXNDC12O95881 172 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 B4GALT1P15291 398 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 NPR2P20594 1047 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF83P51522 516 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF133P52736 654 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 KRR1Q13601 381 aaKnown RBP11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 ATP6AP1Q15904 470 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 NCMAPQ5T1S8 102 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 SHQ1Q6PI26 577 aaKnown RBP11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 DNM1P34Q6PK57 102 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 CD300LDQ6UXZ3 194 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 CDC20BQ86Y33 519 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 HIPK1Q86Z02 1210 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 WDFY1Q8IWB7 410 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC22A24Q8N4F4 322 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 FAM169BQ8N8A8 192 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 ATG16L2Q8NAA4 619 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 DNAJC9Q8WXX5 260 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 LURAP1Q96LR2 239 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 SAMD8Q96LT4 415 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 FEVQ99581 238 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 KCNS3Q9BQ31 491 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 TBC1D23Q9NUY8 699 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 TMEM38BQ9NVV0 291 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 IL20Q9NYY1 176 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 KIF17Q9P2E2 1029 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 FBXL3Q9UKT7 428 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 BAIAP2Q9UQB8 552 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
TRAPPC1-206ENST00000573989 ABCA12Q86UK0 2595 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms