RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CH25HO95992 272 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CRYAAP02489 173 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 HIST1H2ABP04908 130 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 HEXAP06865 529 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 KDELR2P33947 212 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ACVR1BP36896 505 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 MECP2P51608 486 aaKnown RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 CRYBA2P53672 197 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 SH3BGRP55822 239 aaPredicted RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 SELENOWP63302 87 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TUBA1BP68363 451 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TUBA4AP68366 448 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 POU3F1Q03052 451 aaPredicted RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 CHRNB3Q05901 458 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ZP4Q12836 540 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TNK1Q13470 666 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CAMK2DQ13557 499 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 RAB35Q15286 201 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ETFDHQ16134 617 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ZNF74Q16587 644 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CEACAM16Q2WEN9 425 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 PHYHD1Q5SRE7 291 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CARD17Q5XLA6 110 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 B3GLCTQ6Y288 498 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 WDR88Q6ZMY6 472 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TUBA1AQ71U36 451 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 HIST3H2AQ7L7L0 130 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CARM1Q86X55 608 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CCDC36Q8IYA8 594 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 C20orf196Q8IYI0 205 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TMEM123Q8N131 208 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 LRRC17Q8N6Y2 441 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ANKS4BQ8N8V4 417 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 HIST1H2ACQ93077 130 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ADAD1Q96M93 576 aaKnown RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 HS6ST2Q96MM7 605 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 SLC38A2Q96QD8 506 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 KCNS3Q9BQ31 491 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 PRSS27Q9BQR3 290 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 SLC19A3Q9BZV2 496 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 PCDHAC1Q9H158 963 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CDIP1Q9H305 208 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 NELFAQ9H3P2 528 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 BARX1Q9HBU1 254 aaPredicted RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 CRLF2Q9HC73 371 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 MOV10Q9HCE1 1003 aaKnown RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 B3GAT2Q9NPZ5 323 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 NANSQ9NR45 359 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 MED29Q9NX70 200 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 TAS2R5Q9NYW4 299 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ARMCX1Q9P291 453 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CRNNQ9UBG3 495 aaPredicted RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 SPEF1Q9Y4P9 236 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 CAPN7Q9Y6W3 813 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 PMF1-BGLAPU3KQ54 211 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 X6R8D5 127 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 FLNAP21333 2647 aaKnown RBP6.47□□□□□ -1.37
NUP88-205ENST00000572809 CADP27708 2225 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 USF3Q68DE3 2245 aa6.47□□□□□ -1.37
NUP88-205ENST00000572809 ZNF469Q96JG9 3925 aaPredicted RBP6.46□□□□□ -1.37
NUP88-205ENST00000572809 HEATR1Q9H583 2144 aaKnown RBP6.46□□□□□ -1.37
NUP88-205ENST00000572809 ELOVL7A1L3X0 281 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 VSTM5A8MXK1 200 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 ZNF99A8MXY4 864 aaPredicted RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 FAM220BPB1ANY3 271 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 ATP6V1G2-DDX39BF2Z307 99 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 BLOC1S5-TXNDC5H3BN57 136 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 KPNA4O00629 521 aaPredicted RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 RNF13O43567 381 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 SSX4O60224 188 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 SHOX2O60902 331 aaPredicted RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 SERPINI2O75830 405 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 IGHV4-39P01824 125 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 UMPSP11172 480 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 COX4I1P13073 169 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 CBR1P16152 277 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 FUT1P19526 365 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 TNFRSF1BP20333 461 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 ARR3P36575 388 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 OR1E2P47887 323 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 TAS2R41P59536 307 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 NAAAQ02083 359 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 PIN1Q13526 163 aaPredicted RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 CYBRD1Q53TN4 286 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 C11orf71Q6IPW1 123 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 SLC35D2Q76EJ3 337 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 SLC15A3Q8IY34 581 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 OR2T12Q8NG77 320 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 OR6N1Q8NGY5 312 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 RCN3Q96D15 328 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 TPD52L3Q96J77 140 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 JMJD8Q96S16 334 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 HOPXQ9BPY8 73 aaPredicted RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 ELAC2Q9BQ52 826 aaKnown RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 RHNO1Q9BSD3 238 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 ZNF426Q9BUY5 554 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 KATNB1Q9BVA0 655 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 CACNG6Q9BXT2 260 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms