RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 M0QX08 132 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ACOX3O15254 700 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 KIAA0513O60268 411 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 TPST1O60507 370 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 DNAJB6O75190 326 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 GCM2O75603 506 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 CDC123O75794 336 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 C1QL1O75973 258 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 MFN2O95140 757 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 H6PDO95479 791 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 PABPC4LP0CB38 370 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF23P17027 643 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ATP6V1C1P21283 382 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 CSRP1P21291 193 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 AQP1P29972 269 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 CDX1P47902 265 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 EMDP50402 254 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ERFP50548 548 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 MMP15P51511 669 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 KCNJ10P78508 379 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 NSDHLQ15738 373 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 NPTX1Q15818 432 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 SYPL1Q16563 259 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ISXQ2M1V0 245 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 LIN52Q52LA3 116 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 TRMT12Q53H54 448 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 CEP78Q5JTW2 689 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 DCST2Q5T1A1 773 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 STPG1Q5TH74 334 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 C1orf189Q5VU69 101 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 MLIPQ5VWP3 458 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 OR2T5Q6IEZ7 315 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 IZUMO2Q6UXV1 221 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 COX15Q7KZN9 410 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 SERPINA12Q8IW75 414 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 METTL27Q8N6F8 245 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 SLC16A11Q8NCK7 471 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 OR5D16Q8NGK9 328 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 OR2T29Q8NH02 315 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 OR8K3Q8NH51 312 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 OR5K1Q8NHB7 308 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 WDR36Q8NI36 951 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 VANGL1Q8TAA9 524 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 GPR151Q8TDV0 419 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 CCDC107Q8WV48 283 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 RAB8BQ92930 207 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 TAMM41Q96BW9 452 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 TPD52L3Q96J77 140 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF597Q96LX8 424 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 VSTM2LQ96N03 204 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 COL21A1Q96P44 957 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 RBM4BQ9BQ04 359 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 RBM4Q9BWF3 364 aaKnown RBP6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ULBP3Q9BZM4 244 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 VN1R1Q9GZP7 353 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 HOXD1Q9GZZ0 328 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 GABARAPL1Q9H0R8 117 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 REEP1Q9H902 201 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 FOLH1BQ9HBA9 442 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 DNAJC4Q9NNZ3 241 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 FAM118AQ9NWS6 357 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 OCIAD1Q9NX40 245 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 USE1Q9NZ43 259 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 WDR45Q9Y484 360 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 LRRC42Q9Y546 428 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 ORC6Q9Y5N6 252 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 V9GYQ6 96 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 SCN3AQ9NY46 2000 aa6.32□□□□□ -1.4
CNOT1-222ENST00000570139 MED19A0JLT2 244 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 FRG2CA6NGY1 282 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 SAGE2PA6NJ88 616 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 G3V2T6 193 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ALOX12BO75342 701 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CSO75390 466 aaKnown RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 E2F6O75461 281 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GAGE7O76087 117 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 IGKV3-11P04433 115 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CT62P0C5K7 136 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GAGE12FP0CL80 117 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GAGE12GP0CL81 117 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GAGE12IP0CL82 117 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ACP2P11117 423 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 S1PR1P21453 382 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 DRD5P21918 477 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 RPS4Y1P22090 263 aaKnown RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CD82P27701 267 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 PPICP45877 212 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CAMLGP49069 296 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 NUDT6P53370 316 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CRYBA2P53672 197 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 EMP2P54851 167 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 BTG2P78543 158 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 VLDLRP98155 873 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 EGR4Q05215 589 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 FUT5Q11128 374 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 PNRC1Q12796 327 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GAGE1Q13065 139 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GAGE4Q13068 117 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 DUSP5Q16690 384 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms