RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 KRTCAP2Q8N6L1 136 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 RAB40AQ8WXH6 277 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 SLC38A4Q969I6 547 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 SLC35B4Q969S0 331 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 TSPAN32Q96QS1 320 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 DCLRE1CQ96SD1 692 aaKnown RBP7.3□□□□□ -1.24
SMG1-216ENST00000569122 CHIAQ9BZP6 476 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 SLC38A1Q9H2H9 487 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 NPHS2Q9NP85 383 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 TNFRSF19Q9NS68 423 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 SLC6A13Q9NSD5 602 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 TMEM106BQ9NUM4 274 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 ZNF224Q9NZL3 707 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 RPS6KB2Q9UBS0 482 aa7.3□□□□□ -1.24
SMG1-216ENST00000569122 TRAV36DV7A0A075B6V5 113 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 TRAV40A0A0B4J280 105 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 H3BSA7 217 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 M0R082 166 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 HMGN4O00479 90 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SURF4O15260 269 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 DHHO43323 396 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 XPNPEP2O43895 674 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 TRIM13O60858 407 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 CPSF4O95639 269 aaKnown RBP7.29□□□□□ -1.24
SMG1-216ENST00000569122 PROCP04070 461 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 ABHD2P08910 425 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 GKN3PP0CG01 181 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 MDH2P40926 338 aaKnown RBP7.29□□□□□ -1.24
SMG1-216ENST00000569122 CSNK1A1P48729 337 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 AQP5P55064 265 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 BTG1P62324 171 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SLC7A5Q01650 507 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 BST1Q10588 318 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SYPL1Q16563 259 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 DPY19L1Q2PZI1 675 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SMU1Q2TAY7 513 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 NRN1LQ496H8 165 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 XKR7Q5GH72 579 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 OR4F3Q6IEY1 312 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 C6orf89Q6UWU4 347 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 VASH1Q7L8A9 365 aaPredicted RBP7.29□□□□□ -1.24
SMG1-216ENST00000569122 HMGN2P46Q86SG4 172 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 ZNF584Q8IVC4 421 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SKA3Q8IX90 412 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 CLECL1Q8IZS7 167 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 CLEC4FQ8N1N0 589 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 MIER2Q8N344 545 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SLC22A24Q8N4F4 322 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SCAIQ8N9R8 606 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 OR1J1Q8NGS3 322 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 OR6S1Q8NH40 331 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 OR52P1PQ8NH57 321 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 ZNF417Q8TAU3 575 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 LRTOMTQ8WZ04 291 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SAMD8Q96LT4 415 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 ZNF587Q96SQ5 575 aaPredicted RBP7.29□□□□□ -1.24
SMG1-216ENST00000569122 EPYCQ99645 322 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 RHOXF2Q9BQY4 288 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 C1orf50Q9BV19 199 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 PTDSS2Q9BVG9 487 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
SMG1-216ENST00000569122 ASPNQ9BXN1 380 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 KCNN2Q9H2S1 579 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 MARCH7Q9H992 704 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 NECAP2Q9NVZ3 263 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
SMG1-216ENST00000569122 MIOXQ9UGB7 285 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 IFT52Q9Y366 437 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 RYR3Q15413 4870 aa7.29□□□□□ -1.24
SMG1-216ENST00000569122 IGHV3OR16-10A0A075B7F0 116 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 IGHV2-70DA0A0C4DH43 119 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 KIR2DS1A0A191URI9 304 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 TMEM247A6NEH6 219 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 F5H0A9 414 aaPredicted RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 PLIN3O60664 434 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 VSIG8P0DPA2 414 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 G6PDP11413 515 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 FUT4P22083 530 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 GRPRP30550 384 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 MMP15P51511 669 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 KRTAP10-3P60369 221 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 GNB2P62879 340 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 TNFAIP6P98066 277 aaPredicted RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 EMX2Q04743 252 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 LRRC74AQ0VAA2 488 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 UGT3A2Q3SY77 523 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 PHYHD1Q5SRE7 291 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 RNF220Q5VTB9 566 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 MBNL2Q5VZF2 373 aaKnown RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 Q6ZTK2 550 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 NLRC3Q7RTR2 1065 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 SLC16A14Q7RTX9 510 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 PXKQ7Z7A4 578 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 JAZF1Q86VZ6 243 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 GALNT4Q8N4A0 578 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 ZNF283Q8N7M2 679 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 ANKFN1Q8N957 763 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 NOA1Q8NC60 698 aaKnown RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 HIPK4Q8NE63 616 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms