RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 NANPQ8TBE9 248 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
USB1-214ENST00000568848 CCL17Q92583 94 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 ZBTB18Q99592 522 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 GAL3ST1Q99999 423 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 ZNF385DQ9H6B1 395 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 SLAMF8Q9P0V8 285 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 LOC102725191A0A1B0GVB3 256 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 ZSCAN5BA6NJL1 495 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 TRPC5OSA6NMA1 111 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 CLDN25C9JDP6 229 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 OR2T1O43869 369 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 UBL3O95164 117 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 ADORA3P0DMS8 318 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 CCNOP22674 350 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 CRYBB2P43320 205 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 CDH12P55289 794 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 MRPS11P82912 194 aaKnown RBP12.59□□□□□ -0.39
USB1-214ENST00000568848 SCGB2A2Q13296 93 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 RGNQ15493 299 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 OR1Q1Q15612 314 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 LRRC18Q8N456 261 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 DEFB108BQ8NET1 73 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 SNX33Q8WV41 574 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 TMEM54Q969K7 222 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 RAB39BQ96DA2 213 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 OR52B2Q96RD2 323 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 DCLRE1CQ96SD1 692 aaKnown RBP12.59□□□□□ -0.39
USB1-214ENST00000568848 ASPNQ9BXN1 380 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
USB1-214ENST00000568848 IKZF5Q9H5V7 419 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 RNF121Q9H920 327 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
USB1-214ENST00000568848 CDH20Q9HBT6 801 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 NPHS2Q9NP85 383 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 A4GALTQ9NPC4 353 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 TMEM38BQ9NVV0 291 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 SLC25A37Q9NYZ2 338 aa12.59□□□□□ -0.39
USB1-214ENST00000568848 LEF1Q9UJU2 399 aaPredicted RBP12.59□□□□□ -0.39
USB1-214ENST00000568848 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
USB1-214ENST00000568848 A0A0B4J2E0 115 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 A0A1B0GX12 115 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 M0R3H8 397 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 KPNA4O00629 521 aaPredicted RBP12.58□□□□□ -0.4
USB1-214ENST00000568848 SLC22A3O75751 556 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 ZNF250P15622 560 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 HOXB9P17482 250 aaPredicted RBP12.58□□□□□ -0.4
USB1-214ENST00000568848 MDKP21741 143 aaPredicted RBP12.58□□□□□ -0.4
USB1-214ENST00000568848 TTMPQ5BVD1 217 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 REP15Q6BDI9 236 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 LEG1Q6P5S2 330 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 TSPYL5Q86VY4 417 aaPredicted RBP12.58□□□□□ -0.4
USB1-214ENST00000568848 ZNF101Q8IZC7 436 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 ADPRHL1Q8NDY3 354 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 IPCEF1Q8WWN9 437 aaPredicted RBP12.58□□□□□ -0.4
USB1-214ENST00000568848 LRR1Q96L50 414 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 SAP30LQ9HAJ7 183 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 DECR2Q9NUI1 292 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 MRPL39Q9NYK5 338 aaKnown RBP12.58□□□□□ -0.4
USB1-214ENST00000568848 GLTPQ9NZD2 209 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 IFT52Q9Y366 437 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
USB1-214ENST00000568848 CLIC1O00299 241 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 GPANK1O95872 356 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 THY1P04216 161 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 LSP1P33241 339 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 WNT5AP41221 380 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 RGS8P57771 180 aaPredicted RBP12.57□□□□□ -0.4
USB1-214ENST00000568848 TXNL4AP83876 142 aaKnown RBP12.57□□□□□ -0.4
USB1-214ENST00000568848 PDCD4Q53EL6 469 aaKnown RBP12.57□□□□□ -0.4
USB1-214ENST00000568848 THEM4Q5T1C6 240 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 RBM45Q8IUH3 476 aaKnown RBP12.57□□□□□ -0.4
USB1-214ENST00000568848 LSMEM1Q8N8F7 131 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
USB1-214ENST00000568848 OR1J1Q8NGS3 322 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 BBS10Q8TAM1 723 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 ITCHQ96J02 903 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
USB1-214ENST00000568848 ATP6V1G3Q96LB4 118 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 ZNF347Q96SE7 839 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 BCL2L10Q9HD36 194 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 TNFRSF19Q9NS68 423 aa12.57□□□□□ -0.4
USB1-214ENST00000568848 C5orf58C9J3I9 102 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 J3QLI3 93 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 UBOX5O94941 541 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 CH25HO95992 272 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 OPN1SWP03999 348 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 QDPRP09417 244 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 ZCCHC18P0CG32 403 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 IGHV4-38-2P0DP08 117 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 ANPEPP15144 967 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 PRTN3P24158 256 aa12.56□□□□□ -0.4
USB1-214ENST00000568848 PRKAR1BP31321 381 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms