RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 RCN3Q96D15 328 aa10.88□□□□□ -0.67
RNF40-208ENST00000565995 ARMC7Q9H6L4 198 aa10.88□□□□□ -0.67
RNF40-208ENST00000565995 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
RNF40-208ENST00000565995 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
RNF40-208ENST00000565995 ARL8BQ9NVJ2 186 aa10.88□□□□□ -0.67
RNF40-208ENST00000565995 P2RX2Q9UBL9 471 aa10.88□□□□□ -0.67
RNF40-208ENST00000565995 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
RNF40-208ENST00000565995 IFT52Q9Y366 437 aa10.88□□□□□ -0.67
RNF40-208ENST00000565995 NDUFAF1Q9Y375 327 aa10.88□□□□□ -0.67
RNF40-208ENST00000565995 SLC22A23A1A5C7 686 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 POM121CA8CG34 1229 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 M0R082 166 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 M0R3G1 203 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 MRASO14807 208 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 RRP9O43818 475 aaKnown RBP10.87□□□□□ -0.67
RNF40-208ENST00000565995 SEC14L2O76054 403 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 PRSS23O95084 383 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 UBL3O95164 117 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 ANP32DO95626 131 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 HPRP00739 348 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 SERPINA5P05154 406 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 ARAFP10398 606 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 GTF2E2P29084 291 aaKnown RBP10.87□□□□□ -0.67
RNF40-208ENST00000565995 GRPRP30550 384 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 NUDT2P50583 147 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 TEKQ02763 1124 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 KRT72Q14CN4 511 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 MFSD13AQ14CX5 517 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 DCAF12L2Q5VW00 463 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 SLC2A7Q6PXP3 512 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 PIWIL3Q7Z3Z3 882 aaKnown RBP10.87□□□□□ -0.67
RNF40-208ENST00000565995 PCYOX1LQ8NBM8 494 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 ZNF417Q8TAU3 575 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 RNF217Q8TC41 542 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 SLC38A4Q969I6 547 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 ZNF587Q96SQ5 575 aaPredicted RBP10.87□□□□□ -0.67
RNF40-208ENST00000565995 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 DUSP13Q9UII6 198 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 GPR160Q9UJ42 338 aa10.87□□□□□ -0.67
RNF40-208ENST00000565995 IGKV1D-42A0A075B6H8 117 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 TRAV36DV7A0A075B6V5 113 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 ERICH4A6NGS2 130 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 ZCCHC18P0CG32 403 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 HLA-DOBP13765 273 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 CALB2P22676 271 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 PRTN3P24158 256 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 GIPRP48546 466 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
RNF40-208ENST00000565995 MNAT1P51948 309 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 NFYCQ13952 458 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 RGS7BPQ6MZT1 257 aaPredicted RBP10.86□□□□□ -0.67
RNF40-208ENST00000565995 MSANTD1Q6ZTZ1 278 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 DOK3Q7L591 496 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 DHDDSQ86SQ9 333 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 WDFY1Q8IWB7 410 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 UEVLDQ8IX04 471 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 SCAIQ8N9R8 606 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 TSPEARQ8WU66 669 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 NSL1Q96IY1 281 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 ITCHQ96J02 903 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 FOXB1Q99853 325 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 RSPO3Q9BXY4 272 aaPredicted RBP10.86□□□□□ -0.67
RNF40-208ENST00000565995 SLITRK2Q9H156 845 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 C7orf69Q9H7B7 122 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 BCL2L10Q9HD36 194 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 HINT3Q9NQE9 182 aaKnown RBP10.86□□□□□ -0.67
RNF40-208ENST00000565995 SLC6A13Q9NSD5 602 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 THUMPD1Q9NXG2 353 aaKnown RBP10.86□□□□□ -0.67
RNF40-208ENST00000565995 SLCO1C1Q9NYB5 712 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 TAAR3PQ9P1P4 343 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 POFUT2Q9Y2G5 429 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 CORINQ9Y5Q5 1042 aa10.86□□□□□ -0.67
RNF40-208ENST00000565995 A0A087WUJ7 227 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 IGHV1-69-2A0A0G2JMI3 117 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 RFXANKO14593 260 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 SNAP29O95721 258 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 RAB36O95755 333 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 CLPTM1O96005 669 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 BCHEP06276 602 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 ETFAP13804 333 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 B4GALT1P15291 398 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 DSTNP60981 165 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 CCL8P80075 99 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 MVKQ03426 396 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 ZP4Q12836 540 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 RAB39AQ14964 217 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 ZSCAN26Q16670 478 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 GLIPR1L2Q4G1C9 344 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 PXKQ7Z7A4 578 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 ZNF519Q8TB69 540 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 DNAJA4Q8WW22 397 aaPredicted RBP10.85□□□□□ -0.67
RNF40-208ENST00000565995 TXNDC15Q96J42 360 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 EMC6Q9BV81 110 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 EFCAB1Q9HAE3 211 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.85□□□□□ -0.67
RNF40-208ENST00000565995 FZR1Q9UM11 496 aa10.85□□□□□ -0.67
RNF40-208ENST00000565995 POLR3KQ9Y2Y1 108 aaPredicted RBP10.85□□□□□ -0.67
RNF40-208ENST00000565995 WIPI2Q9Y4P8 454 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms