RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 CCDC71Q8IV32 467 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-206ENST00000565990 C10orf53Q8N6V4 93 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 LRRC75AQ8NAA5 344 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 PIGXQ8TBF5 258 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 ABHD3Q8WU67 409 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 RND1Q92730 232 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 Q96MT0 163 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 TNFRSF13CQ96RJ3 184 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 PCNX1Q96RV3 2341 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 FEVQ99581 238 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 PRRG4Q9BZD6 226 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 DCSTAMPQ9H295 470 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 KRCC1Q9NPI7 259 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-206ENST00000565990 PLSCR4Q9NRQ2 329 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 KLHL9Q9P2J3 617 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF629Q9UEG4 869 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-206ENST00000565990 MGAT4BQ9UQ53 548 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 SIGLEC7Q9Y286 467 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 SLC5A6Q9Y289 635 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 PEX16Q9Y5Y5 336 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 FLNCQ14315 2725 aa11.22□□□□□ -0.61
SF3B3-206ENST00000565990 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 A0A0G2JNJ9 132 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 CLEC18AA5D8T8 446 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 ZAR1LA6NP61 321 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 J3QRK9 145 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 MAGEB3O15480 346 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 AIREO43918 545 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 FADS2O95864 444 aaKnown RBP11.21□□□□□ -0.61
SF3B3-206ENST00000565990 IL18BPO95998 194 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 CGAP01215 116 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 CTSSP25774 331 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 NTF4P34130 210 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 SNRPGP62308 76 aaKnown RBP11.21□□□□□ -0.61
SF3B3-206ENST00000565990 ADORA2A-AS1P86434 159 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 IL1RL1Q01638 556 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 COX10Q12887 443 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 FOXF2Q12947 444 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 LAPTM4AQ15012 233 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 TIGD6Q17RP2 521 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 CLEC18BQ6UXF7 455 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 PLEKHG7Q6ZR37 379 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 AHSA2Q719I0 299 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 FAM214BQ7L5A3 538 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 OAFQ86UD1 273 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 FJX1Q86VR8 437 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 MEX3DQ86XN8 651 aaKnown RBP11.21□□□□□ -0.61
SF3B3-206ENST00000565990 TUSC5Q8IXB3 177 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 KDM8Q8N371 416 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 CLEC18CQ8NCF0 446 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 NAXEQ8NCW5 288 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 OR9Q2Q8NGE9 314 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 MCFD2Q8NI22 146 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 GGHQ92820 318 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 STARD4Q96DR4 205 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 FAM46AQ96IP4 442 aaKnown RBP11.21□□□□□ -0.61
SF3B3-206ENST00000565990 NEURL2Q9BR09 285 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 CLN6Q9NWW5 311 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 IMPAD1Q9NX62 359 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 KLHL13Q9P2N7 655 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 Q9UFV3 132 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 SH3BGRL2Q9UJC5 107 aa11.21□□□□□ -0.61
SF3B3-206ENST00000565990 ERRFI1Q9UJM3 462 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-206ENST00000565990 ALPK2Q86TB3 2170 aa11.21□□□□□ -0.62
SF3B3-206ENST00000565990 A0A075B6Q4 140 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 IRGMA1A4Y4 181 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 BLOC1S5-TXNDC5H3BN57 136 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 J3QKU1 62 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 GPR171O14626 319 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 UPK1BO75841 260 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 ZNF432O94892 652 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 OR6A2O95222 327 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 PTTG1O95997 202 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 TMIGD3P0DMS9 266 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-206ENST00000565990 SAGP10523 405 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-206ENST00000565990 BMP4P12644 408 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 AGAP20933 346 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 GTF2E2P29084 291 aaKnown RBP11.2□□□□□ -0.62
SF3B3-206ENST00000565990 SOX6P35712 828 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 AQP2P41181 271 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 MAP2K4P45985 399 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 GPR4P46093 362 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 FXYD6P3P58550 94 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 PRPS1P60891 318 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 RPL18Q07020 188 aaKnown RBP11.2□□□□□ -0.62
SF3B3-206ENST00000565990 PIGFQ07326 219 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 SRSF1Q07955 248 aaKnown RBP eCLIP11.2□□□□□ -0.62
SF3B3-206ENST00000565990 PUDPQ08623 228 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 STX19Q8N4C7 294 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 AQP11Q8NBQ7 271 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 OR9K2Q8NGE7 335 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 OR51A7Q8NH64 312 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 TMEM45BQ96B21 275 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 INTS12Q96CB8 462 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms