RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 SLC36A2Q495M3 483 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 REEP3Q6NUK4 255 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 RBMS3Q6XE24 437 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 CROCCP2Q86T23 111 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 RANBP3LQ86VV4 465 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 MIER2Q8N344 545 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 C10orf53Q8N6V4 93 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 CPEB3Q8NE35 698 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 RNF217Q8TC41 542 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 MOGAT1Q96PD6 335 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 ZNF607Q96SK3 696 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 SLC6A7Q99884 636 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 PAIP1Q9H074 479 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 KCNK9Q9NPC2 374 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 WIPI2Q9Y4P8 454 aa13.43□□□□□ -0.26
HERPUD1-205ENST00000562914 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 UBDO15205 165 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 KCNAB3O43448 404 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 CDC14BO60729 498 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 SNNO75324 88 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 SERPINB7O75635 380 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 LCKP06239 509 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 ADORA3P0DMS8 318 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 HKR1P10072 659 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 ADRA2CP18825 462 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 DRD4P21917 467 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 UCP2P55851 309 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 BIDP55957 195 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 UBA52P62987 128 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 PLP2Q04941 152 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 SLC3A1Q07837 685 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 ZP4Q12836 540 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 AVPI1Q5T686 147 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 UNQ6126/PRO20091Q6UXV3 157 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 C1orf174Q8IYL3 243 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 ZDHHC22Q8N966 263 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 ZNF566Q969W8 418 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 ELMOD3Q96FG2 381 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 SLC25A44Q96H78 314 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 PAIP2Q9BPZ3 127 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 C7orf69Q9H7B7 122 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 SAP30LQ9HAJ7 183 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 TMEM38BQ9NVV0 291 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 GMEB1Q9Y692 573 aa13.42□□□□□ -0.26
HERPUD1-205ENST00000562914 IQCMA0A1B0GVH7 501 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 TMPRSS2O15393 492 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 TPD52L2O43399 206 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 FMO6PO60774 539 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 PRSS23O95084 383 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 MFN2O95140 757 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 CLPTM1O96005 669 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 FSHBP01225 129 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 IGHV3-13P01766 116 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 FAM157BP0CG42 384 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 CDK6Q00534 326 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 MPP2Q14168 576 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 ALKBH6Q3KRA9 238 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 TNFAIP8L3Q5GJ75 292 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 GCNT6Q5T4J0 391 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 ZNF613Q6PF04 617 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 USP51Q70EK9 711 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 SLC35D2Q76EJ3 337 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 NFKBIDQ8NI38 313 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 GPA33Q99795 319 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 TMEM38AQ9H6F2 299 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 RNF121Q9H920 327 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 CGGBP1Q9UFW8 167 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 CORO2BQ9UQ03 480 aa13.41□□□□□ -0.26
HERPUD1-205ENST00000562914 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 DHHO43323 396 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 SERPINI2O75830 405 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 PATE4P0C8F1 98 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 KITP10721 976 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 HOXB9P17482 250 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 SLC6A2P23975 617 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 LIPAP38571 399 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 CDH12P55289 794 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 LRIF1Q5T3J3 769 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 WDR88Q6ZMY6 472 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 SLC16A14Q7RTX9 510 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 FGFBP3Q8TAT2 258 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 GAL3ST1Q99999 423 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 ESM1Q9NQ30 184 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 CYSLTR2Q9NS75 346 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 PCDHGB1Q9Y5G3 927 aa13.4□□□□□ -0.26
HERPUD1-205ENST00000562914 C11orf98E9PRG8 122 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 CHP2O43745 196 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 TPST1O60507 370 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 FOXH1O75593 365 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 MRPL19P49406 292 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 ZNF81P51508 661 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 ZNF84P51523 738 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 TUSC1Q2TAM9 212 aa13.39□□□□□ -0.27
HERPUD1-205ENST00000562914 LRFN4Q6PJG9 635 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms