RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 FUNDC1Q8IVP5 155 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 SEMA6DQ8NFY4 1073 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 OR6X1Q8NH79 312 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 FGFBP3Q8TAT2 258 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 SYNPRQ8TBG9 265 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 ZFAND2BQ8WV99 257 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 HIST1H2ACQ93077 130 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM54Q969K7 222 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 PLA2G12AQ9BZM1 189 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 RACGAP1Q9H0H5 632 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 IKZF5Q9H5V7 419 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM38BQ9NVV0 291 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 C17orf100A8MU93 164 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 CHP2O43745 196 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 FMO6PO60774 539 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 MFN2O95140 757 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 CLPTM1O96005 669 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 PNPP00491 289 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 MT-ND5P03915 603 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 DRD4P21917 467 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 MRPL19P49406 292 aaKnown RBP11.11□□□□□ -0.63
SF3B3-202ENST00000562722 CLRN1P58418 232 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 GLO1Q04760 184 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 PLP2Q04941 152 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF74Q16587 644 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 PCGF3Q3KNV8 242 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 SLC36A2Q495M3 483 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 AGKQ53H12 422 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 ENTPD8Q5MY95 495 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 NHLRC1Q6VVB1 395 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 WDR88Q6ZMY6 472 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 PAQR4Q8N4S7 273 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-202ENST00000562722 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 C11orf65Q8NCR3 313 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 OR4K5Q8NGD3 323 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 VANGL1Q8TAA9 524 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-202ENST00000562722 C11orf40Q8WZ69 217 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 GCDHQ92947 438 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-202ENST00000562722 SLC25A44Q96H78 314 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-202ENST00000562722 EBF4Q9BQW3 602 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 C1orf198Q9H425 327 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF665Q9H7R5 613 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 NANSQ9NR45 359 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 DECR2Q9NUI1 292 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 SLCO1C1Q9NYB5 712 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 PCDHB10Q9UN67 800 aa11.11□□□□□ -0.63
SF3B3-202ENST00000562722 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 A0A0G2JMP0 313 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 A0A0X1KG70 313 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 IQCMA0A1B0GVH7 501 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 MCIDASD6RGH6 385 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 TRIM77I1YAP6 450 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 DHHO43323 396 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 RP2O75695 350 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 MPZL1O95297 269 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 TGDSO95455 350 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 BCL10O95999 233 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 PTHP01270 115 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 IGHG1P01857 330 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 VIMP08670 466 aaKnown RBP11.1□□□□□ -0.63
SF3B3-202ENST00000562722 QDPRP09417 244 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 GPX2P18283 190 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 EPHA1P21709 976 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 RAD52P43351 418 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 IDH3AP50213 366 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF84P51523 738 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 ERVS71-1P61550 626 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 LMO4P61968 165 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 TEKQ02763 1124 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 HSF2Q03933 536 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 ACSM5Q6NUN0 579 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF771Q7L3S4 317 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-202ENST00000562722 NANOGNBQ7Z5D8 188 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 RBM15BQ8NDT2 890 aaKnown RBP11.1□□□□□ -0.63
SF3B3-202ENST00000562722 OR4M2Q8NGB6 313 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 OR1J2Q8NGS2 313 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 LRRC8CQ8TDW0 803 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 RAB39BQ96DA2 213 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 C7orf26Q96N11 449 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 TSPAN32Q96QS1 320 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 ARHGDIGQ99819 225 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 CPPED1Q9BRF8 314 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-202ENST00000562722 SLC52A3Q9NQ40 469 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 TAS2R5Q9NYW4 299 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 SLC7A7Q9UM01 511 aa11.1□□□□□ -0.63
SF3B3-202ENST00000562722 TRBV5-3A0A0A0MS03 114 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 IGHV1-69-2A0A0G2JMI3 117 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 BLOC1S5-TXNDC5H3BN57 136 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 M0QX08 132 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-202ENST00000562722 CCNOP22674 350 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 APLNRP35414 380 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 ZP4Q12836 540 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms