RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TOXO94900 526 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 SLC25A14O95258 325 aaPredicted RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 MELTFP08582 738 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ICAM2P13598 275 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 FOLR1P15328 257 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ZNF7P17097 686 aaPredicted RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 SDC1P18827 310 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 MMP11P24347 488 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 CCNCP24863 283 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 HTR2AP28223 471 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 HTR1EP28566 365 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ADRA1AP35348 466 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 CD151P48509 253 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ARHGDIBP52566 201 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 DCDP81605 110 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 PNOCQ13519 176 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 SLC10A1Q14973 349 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 SYCP1Q15431 976 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 TRIP10Q15642 601 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 SLC1A5Q15758 541 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 UBE2V2Q15819 145 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 DPYSL2Q16555 572 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 SLC5A12Q1EHB4 618 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 C17orf58Q2M2W7 97 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 DCST2Q5T1A1 773 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 LGSNQ5TDP6 509 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 SEL1L2Q5TEA6 688 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 LRRC66Q68CR7 880 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 DNAJC24Q6P3W2 148 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 DCUN1D2Q6PH85 259 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 WDR59Q6PJI9 974 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 BTNL3Q6UXE8 466 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ADAMTSL5Q6ZMM2 481 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 TMEM135Q86UB9 458 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 FGFRL1Q8N441 504 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 NFAM1Q8NET5 270 aaPredicted RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 OR2Y1Q8NGV0 311 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 AGAP11Q8TF27 550 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 PHF10Q8WUB8 498 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 ITLN2Q8WWU7 325 aaPredicted RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 PATE1Q8WXA2 126 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.91□□□□□ -1.94
HERC1-215ENST00000561436 NTNG2Q96CW9 530 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 AKR1E2Q96JD6 320 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 TSGA13Q96PP4 275 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 CSPG4P5Q96PW8 444 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 RANBP9Q96S59 729 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 FOXC2Q99958 501 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 APOL2Q9BQE5 337 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 RIOK2Q9BVS4 552 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 TBC1D10AQ9BXI6 508 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 KIR3DX1Q9H7L2 352 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 COQ10BQ9H8M1 238 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 LIN28AQ9H9Z2 209 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 MCCC2Q9HCC0 563 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 MRPL47Q9HD33 250 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 ACP6Q9NPH0 428 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 EXOSC3Q9NQT5 275 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 GPATCH2LQ9NWQ4 482 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 ZNF581Q9P0T4 197 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 RNF115Q9Y4L5 304 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 MRPS18BQ9Y676 258 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 C2CD3Q4AC94 2353 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 DSPP15924 2871 aaKnown RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 MUC22E2RYF6 1773 aaPredicted RBP2.91□□□□□ -1.94
HERC1-215ENST00000561436 PLXNB3Q9ULL4 1909 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 KALRNO60229 2985 aa2.91□□□□□ -1.94
HERC1-215ENST00000561436 NAV3Q8IVL0 2385 aa2.9□□□□□ -1.94
HERC1-215ENST00000561436 SPTA1P02549 2419 aa2.9□□□□□ -1.94
HERC1-215ENST00000561436 AKAP13Q12802 2813 aa2.9□□□□□ -1.94
HERC1-215ENST00000561436 NOTCH2Q04721 2471 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 IGKV3D-20A0A0C4DH25 116 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 IGHV5-51A0A0C4DH38 117 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 A0A1W2PQ72 361 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 GSAPA4D1B5 854 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 MGAT4DA6NG13 374 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 PDZK1P1A8MUH7 402 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 A8MUI8 341 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 C2orf74A8MZ97 194 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 DFFAO00273 331 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 IMPA2O14732 288 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 PPIHO43447 177 aaKnown RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 GPRIN2O60269 458 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 RAMP1O60894 148 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 SMPD2O60906 423 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 STX11O75558 287 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 ZNF189O75820 626 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 KLF7O75840 302 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 CDK14O94921 469 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 OR4F21O95013 312 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CAPN1P07384 714 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 ANXA3P12429 323 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 GZMAP12544 262 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 BCKDHAP12694 445 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CD99P14209 185 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 HMGCLP35914 325 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CA7P43166 264 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 RGRP47804 291 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 GFERP55789 205 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 BDH1Q02338 343 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms