RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 FOXB1Q99853 325 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 SHARPINQ9H0F6 387 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 NOX3Q9HBY0 568 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 ARGLU1Q9NWB6 273 aaPredicted RBP6.98□□□□□ -1.29
TRAF3-205ENST00000558700 MED29Q9NX70 200 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 POFUT2Q9Y2G5 429 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 NDUFAF1Q9Y375 327 aa6.98□□□□□ -1.29
TRAF3-205ENST00000558700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.98□□□□□ -1.291e-7■■■■■ 35.1
TRAF3-205ENST00000558700 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF726A6NNF4 738 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 LMX1BO60663 402 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 UBL3O95164 117 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF205O95201 554 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 OR6A2O95222 327 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 RAB36O95755 333 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ADORA3P0DMS8 318 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 PF4V1P10720 104 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 CD79AP11912 226 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 HLA-DOBP13765 273 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 B4GALT1P15291 398 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 AHCYP23526 432 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 NOS3P29474 1203 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 THBS4P35443 961 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 CDH12P55289 794 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 MTPNP58546 118 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 HGFACQ04756 655 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 LSAMPQ13449 338 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 CAMK2DQ13557 499 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 DAG1Q14118 895 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ADRM1Q16186 407 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 TRMT5Q32P41 509 aaKnown RBP6.97□□□□□ -1.29
TRAF3-205ENST00000558700 IQCCQ4KMZ1 466 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 RUNDC3AQ59EK9 446 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 DLEU7Q6UYE1 221 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF627Q7L945 461 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 SPATA21Q7Z572 469 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 PXKQ7Z7A4 578 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ALPK2Q86TB3 2170 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 PTOV1Q86YD1 416 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 SVOPLQ8N434 492 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 OR5J2Q8NH18 312 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 SLC26A7Q8TE54 656 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 CKAP2Q8WWK9 683 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 NEU4Q8WWR8 484 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-205ENST00000558700 RASSF5Q8WWW0 418 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 TMEM158Q8WZ71 300 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 MPP4Q96JB8 637 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 MAGEB18Q96M61 343 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 MOGAT1Q96PD6 335 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 EMC6Q9BV81 110 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 RSPO3Q9BXY4 272 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-205ENST00000558700 BEX2Q9BXY8 128 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 BPESC1Q9GZL8 116 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 DENND2DQ9H6A0 471 aaPredicted RBP6.97□□□□□ -1.29
TRAF3-205ENST00000558700 ZNF385DQ9H6B1 395 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 TCF7L1Q9HCS4 588 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 MRGBPQ9NV56 204 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 CMAHPQ9Y471 501 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
TRAF3-205ENST00000558700 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.29
TRAF3-205ENST00000558700 IGHV4-61A0A0C4DH41 118 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 TRAPPC13A5PLN9 417 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 CPSF4LA6NMK7 179 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 LRRN3E7EW58 273 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 C11orf98E9PRG8 122 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 MS4A18H0YCH9 400 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 M0R233 179 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 PLPP3O14495 311 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 TPST2O60704 377 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 EDF1O60869 148 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 HLA-HP01893 362 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 ZNF23P17027 643 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 IGFBP5P24593 272 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 PTDSS1P48651 473 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 CHN2P52757 468 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 BIDP55957 195 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 RPL11P62913 178 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 GALK2Q01415 458 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 ZNF74Q16587 644 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 MS4A18Q3C1V0 323 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 ENTPD8Q5MY95 495 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 PHYHD1Q5SRE7 291 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 KRT80Q6KB66 452 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 TTC33Q6PID6 262 aaPredicted RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 HDDC2Q7Z4H3 204 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 NANOGNBQ7Z5D8 188 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 GPR32P1Q8NGA4 272 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 OR6T1Q8NGN1 323 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 OR6X1Q8NH79 312 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 VANGL1Q8TAA9 524 aaPredicted RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 ADAMTS16Q8TE57 1224 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 MRPL24Q96A35 216 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 THOC1Q96FV9 657 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 CDADC1Q9BWV3 514 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 SLC19A3Q9BZV2 496 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 PCDHAC1Q9H158 963 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 KAT8Q9H7Z6 458 aaKnown RBP6.96□□□□□ -1.3
TRAF3-205ENST00000558700 VIPAS39Q9H9C1 493 aa6.96□□□□□ -1.3
TRAF3-205ENST00000558700 CHODLQ9H9P2 273 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms