RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ITFG1Q8TB96 612 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 LGALS14Q8TCE9 139 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 VN1R17PQ8TDU5 208 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 TMEM239Q8WW34 195 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 NDRG1Q92597 394 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 TFGQ92734 400 aaPredicted RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 CDKL2Q92772 493 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ITFG2Q969R8 447 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 LRRC45Q96CN5 670 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ITCHQ96J02 903 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 SLC45A3Q96JT2 553 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ZNF597Q96LX8 424 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 OR5B12Q96R08 314 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 PELOQ9BRX2 385 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 MRIQ9BWK5 157 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 NAA50Q9GZZ1 169 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 ARMC7Q9H6L4 198 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 RNF167Q9H6Y7 350 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 JPT2Q9H910 190 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ISG20L2Q9H9L3 353 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 MRM3Q9HC36 420 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 EXD2Q9NVH0 621 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 CLN6Q9NWW5 311 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 NKIRAS1Q9NYS0 192 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 STMN3Q9NZ72 180 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 SLC22A14Q9Y267 594 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 POFUT2Q9Y2G5 429 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 V9GY05 133 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 IGLV7-46A0A075B6I9 117 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 IGLV3-22A0A075B6J6 115 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 MGAT4DA6NG13 374 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 RSPH10B2B2RC85 870 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 E9PAM4 449 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 RNASEK-C17orf49H0YIS7 233 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 H3BN98 237 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 SLC9A3R1O14745 358 aaPredicted RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 FKBP6O75344 327 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 NDUFS6O75380 124 aaKnown RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 EIF3GO75821 320 aaKnown RBP eCLIP3.02□□□□□ -1.93
TDP1-217ENST00000557782 IGLV1-44P01699 117 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 RSPH10BP0C881 870 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 TRIM49P0CI25 452 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 TRIM49CP0CI26 452 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CT45A6P0DMU7 189 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CT45A5P0DMU8 189 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CT45A7P0DMV0 189 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 LAMP1P11279 417 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 NTSP30990 170 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ARR3P36575 388 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 AQP2P41181 271 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 KIR2DS4P43632 304 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 NANOS2P60321 138 aaKnown RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 ERVPABLB-1P60509 514 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 MRPS21P82921 87 aaKnown RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 SERTAD2Q14140 314 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ATP6V1FQ16864 119 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ZFP69Q49AA0 526 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CT45A1Q5HYN5 189 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 VAX1Q5SQQ9 334 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 RUSC1-AS1Q66K80 236 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 PTRHD1Q6GMV3 140 aaKnown RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 C11orf71Q6IPW1 123 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 DBX2Q6ZNG2 339 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 LINC00336Q6ZUF6 198 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 BHLHA15Q7RTS1 189 aaPredicted RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 ABHD12BQ7Z5M8 362 aaPredicted RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 ZNF546Q86UE3 836 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 PLCZ1Q86YW0 608 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 NKAIN4Q8IVV8 208 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 RDH10Q8IZV5 341 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 SPAG16Q8N0X2 631 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CADM2Q8N3J6 435 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ZNF614Q8N883 585 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 Q8NBF4 154 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 NOXO1Q8NFA2 376 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 OR6K6Q8NGW6 343 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CT45A3Q8NHU0 189 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 GTF2H4Q92759 462 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 TNFRSF14Q92956 283 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CPB2Q96IY4 423 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 DNAJC1Q96KC8 554 aaKnown RBP3.02□□□□□ -1.93
TDP1-217ENST00000557782 HIST1H4GQ99525 98 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 RARRES2Q99969 163 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 NAT9Q9BTE0 207 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CCDC28BQ9BUN5 200 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ULBP2Q9BZM5 246 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 SYT4Q9H2B2 425 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 TMEM38AQ9H6F2 299 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ACP6Q9NPH0 428 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 OR2S2Q9NQN1 319 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 MS4A12Q9NXJ0 267 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 EURLQ9NYK6 297 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 CACNG5Q9UF02 275 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 ASIC3Q9UHC3 531 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 GNPTGQ9UJJ9 305 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 HYOU1Q9Y4L1 999 aa3.02□□□□□ -1.93
TDP1-217ENST00000557782 IGKV1D-8A0A087WSZ0 117 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 C1orf232A0A0U1RR37 186 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 A0A1B0GW55 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 RPL37AP8A6NKH3 93 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms