RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TTLL8A6PVC2 850 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 H0Y8X5 98 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 NARSO43776 548 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 NDUFB2O95178 105 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 SNAPINO95295 136 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 SLC35E2P0CK97 266 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 HLA-GP17693 338 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 ITPKBP27987 946 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 RABIFP47224 123 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 MGAT2Q10469 447 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF684Q5T5D7 378 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 ACOT7LQ6ZUV0 252 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 BEST3Q8N1M1 668 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 CSNK1A1LQ8N752 337 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 RELL2Q8NC24 303 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TMEM185AQ8NFB2 350 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 OR52E2Q8NGJ4 325 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 OR5M8Q8NGP6 311 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF417Q8TAU3 575 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 GPBAR1Q8TDU6 330 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 HMGB4Q8WW32 186 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 CTHRC1Q96CG8 243 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TRIM2Q9C040 744 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 SLC25A18Q9H1K4 315 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 EXO5Q9H790 373 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 MEPEQ9NQ76 525 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 STEAP1Q9UHE8 339 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FBXL4Q9UKA2 621 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 CHD7Q9P2D1 2997 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 CENPVL1A0A0U1RR11 272 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 BLACEA4D250 179 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 GGT3PA6NGU5 568 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 ARPC3O15145 178 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 FGF16O43320 207 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 LDB3O75112 727 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 S100A8P05109 93 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 GYPBP06028 91 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 SMIM6P0DI80 62 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 CSRP1P21291 193 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 PAX6P26367 422 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 GABRA3P34903 492 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 PBX2P40425 430 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 TAS2R19P59542 299 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 SNRPNP63162 240 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 UBE2IP63279 158 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNHIT3Q15649 155 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 C4orf46Q504U0 113 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 LY6G6FQ5SQ64 297 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 C11orf87Q6NUJ2 197 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF813Q6ZN06 617 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 OR2W3Q7Z3T1 314 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 FAM220AQ7Z4H9 259 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 LRRTM1Q86UE6 522 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 OOSP2Q86WS3 158 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 PUSL1Q8N0Z8 303 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 OR1J4Q8NGS1 313 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 OR51A7Q8NH64 312 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 LMF2Q9BU23 707 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 SLCO5A1Q9H2Y9 848 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 NKX2-4Q9H2Z4 354 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 ESRP2Q9H6T0 727 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 C8orf33Q9H7E9 229 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 HRASLS2Q9NWW9 162 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 MSRAQ9UJ68 235 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 KCNE5Q9UJ90 142 aa9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 NOSIPQ9Y314 301 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-210ENST00000555252 RNF222A6NCQ9 220 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 OR5H14A6NHG9 310 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF860A6NHJ4 632 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 PEX12O00623 359 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 SRPX2O60687 465 aaPredicted RBP9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ZFPL1O95159 310 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 GKN3PP0CG01 181 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 SKP1P63208 163 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ID2Q02363 134 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 OC90Q02509 493 aaPredicted RBP9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 FHL1Q13642 323 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 TCEA2Q15560 299 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 GUCA2BQ16661 112 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ELP2Q6IA86 826 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 DPY19L2P2Q6ZN68 376 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 Q6ZSR6 202 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 NDUFAF7Q7L592 441 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 FAM122BQ7Z309 247 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 LDLRAD3Q86YD5 345 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 TMEM229BQ8NBD8 167 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 CLEC1AQ8NC01 280 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 DOCK8Q8NF50 2099 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 STOML3Q8TAV4 291 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 GLYATL2Q8WU03 294 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 RGP1Q92546 391 aaPredicted RBP9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 MNTQ99583 582 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 CCDC3Q9BQI4 270 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 DOCK9Q9BZ29 2069 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 NMNAT2Q9BZQ4 307 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms