RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SLC16A1P53985 500 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 CRYZQ08257 329 aaKnown RBP15.64■□□□□ 0.09
SHOX-204ENST00000554971 ZNF169Q14929 603 aaPredicted RBP15.64■□□□□ 0.09
SHOX-204ENST00000554971 CCDC58Q4VC31 144 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 ZNF766Q5HY98 468 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 TRILQ7L0X0 811 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 NUP54Q7Z3B4 507 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 ST6GAL2Q96JF0 529 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 ZNF337Q9Y3M9 751 aa15.64■□□□□ 0.09
SHOX-204ENST00000554971 COL12A1Q99715 3063 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 FAM25AB3EWG3 89 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 FAM25CB3EWG5 89 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 FAM25GB3EWG6 89 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 GATBO75879 557 aaKnown RBP15.63■□□□□ 0.09
SHOX-204ENST00000554971 SP1P08047 785 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 NPR2P20594 1047 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 LCN1P31025 176 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 INPP1P49441 399 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 PNLIPRP2P54317 469 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 PRPS1P60891 318 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 PON3Q15166 354 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 ZFP69Q49AA0 526 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 ARL9Q6T311 187 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 GALNTL5Q7Z4T8 443 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 DND1Q8IYX4 353 aaKnown RBP15.63■□□□□ 0.09
SHOX-204ENST00000554971 HAVCR2Q8TDQ0 301 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 RNF138Q8WVD3 245 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 LIPHQ8WWY8 451 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 SLC39A7Q92504 469 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 SLC7A6Q92536 515 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 PNPLA2Q96AD5 504 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 NTNG2Q96CW9 530 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 C4orf36Q96KX1 117 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 ERMAPQ96PL5 475 aaPredicted RBP15.63■□□□□ 0.09
SHOX-204ENST00000554971 GPX7Q96SL4 187 aaPredicted RBP15.63■□□□□ 0.09
SHOX-204ENST00000554971 TRAF4Q9BUZ4 470 aaPredicted RBP15.63■□□□□ 0.09
SHOX-204ENST00000554971 RTN4RQ9BZR6 473 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 N6AMT1Q9Y5N5 214 aa15.63■□□□□ 0.09
SHOX-204ENST00000554971 TRAV17A0A0B4J275 112 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 G3V3Y1 287 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 LYRM1O43325 122 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 NME2P1O60361 137 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 ICOSLGO75144 302 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 CSTAP01040 98 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 PNMTP11086 282 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 APEHP13798 732 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 NME2P22392 152 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 PTGDSP41222 190 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 GBX2P52951 348 aaPredicted RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 GPR85P60893 370 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 IDNKQ5T6J7 187 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 PRAMEF20Q5VT98 475 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 TIGD3Q6B0B8 471 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 SLC25A25Q6KCM7 469 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 B3GLCTQ6Y288 498 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 CEACAM19Q7Z692 300 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 LSM14AQ8ND56 463 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 CMTM3Q96MX0 182 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 CNN2Q99439 309 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 POLEQ07864 2286 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 HELZ2Q9BYK8 2649 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 ZC3H12DA2A288 527 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 PINLYPA6NC86 204 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 C17orf51A8MQB3 221 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 J3QLW9 94 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 SLC43A1O75387 559 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 ARL6IP5O75915 188 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 NGFRP08138 427 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 ZNF19P17023 458 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 IL12BP29460 328 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 DIO1P49895 249 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 CDONQ4KMG0 1287 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 KLHL26Q53HC5 615 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 RPL22L1Q6P5R6 122 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 APOOLQ6UXV4 268 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 CADM2Q8N3J6 435 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 ZNF527Q8NB42 609 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 OR52E2Q8NGJ4 325 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 OR4C3Q8NH37 302 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 PGLYRP3Q96LB9 341 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 TBX5Q99593 518 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 MARVELD1Q9BSK0 173 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 MMP28Q9H239 520 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 ZCCHC4Q9H5U6 513 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 EXOSC3Q9NQT5 275 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 RYDENQ9NUL5 291 aaKnown RBP15.62■□□□□ 0.09
SHOX-204ENST00000554971 ABRACLQ9P1F3 81 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 HRH3Q9Y5N1 445 aa15.62■□□□□ 0.09
SHOX-204ENST00000554971 SMIM30A4D0T7 59 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 GPRIN2O60269 458 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 ADAM11O75078 769 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 NCR1O76036 304 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 OR7A10O76100 309 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 PRB1P04280 392 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 FAM157BP0CG42 384 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 ELK1P19419 428 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 PTNP21246 168 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 KLRB1Q12918 225 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 INPP5JQ15735 1006 aaPredicted RBP15.61■□□□□ 0.09
SHOX-204ENST00000554971 ACSM3Q53FZ2 586 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms