RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PRR23D2P0DMB1 279 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CALCBP10092 127 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 UBL4AP11441 157 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PSMB1P20618 241 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 HIST1H1TP22492 207 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 IL32P24001 234 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PDHA2P29803 388 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PBLDP30039 288 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CALCRP30988 508 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 BTCP35070 178 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 RABIFP47224 123 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 RAB28P51157 221 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CAPZA1P52907 286 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PDX1P52945 283 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CASP9P55211 416 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CTBP2P56545 445 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CLRN1P58418 232 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PRDX1Q06830 199 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 TSTA3Q13630 321 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 FZD2Q14332 565 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GGTLC2Q14390 218 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 MFSD13AQ14CX5 517 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 MPPED2Q15777 294 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ZIC1Q15915 447 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 AANATQ16613 207 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GSG1Q2KHT4 349 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 DEFB133Q30KQ1 61 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SMUG1Q53HV7 270 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF542PQ5EBM4 170 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SLC35D3Q5M8T2 416 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 MANEAQ5SRI9 462 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PIP5KL1Q5T9C9 394 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GARNL3Q5VVW2 1013 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OLFML2AQ68BL7 652 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 DMKNQ6E0U4 476 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SLC48A1Q6P1K1 146 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 RPL22L1Q6P5R6 122 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 LRRN1Q6UXK5 716 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 RAB11FIP2Q7L804 512 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OVCH2Q7RTZ1 564 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PRSS42Q7Z5A4 293 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 KCTD20Q7Z5Y7 419 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GPAT4Q86UL3 456 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 LHFPL3Q86UP9 236 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 COMMD7Q86VX2 200 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 NRROSQ86YC3 692 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 EIF4E3Q8N5X7 224 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF527Q8NB42 609 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR2L5Q8NG80 312 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR10H5Q8NGA6 315 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR5T2Q8NGG2 359 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR4D11Q8NGI4 311 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR8D4Q8NGM9 314 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR2L8Q8NGY9 312 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR2T27Q8NH04 317 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 FANK1Q8TC84 345 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 LMX1AQ8TE12 382 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ADAMTS15Q8TE58 950 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 TFGQ92734 400 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 KLK6Q92876 244 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 RBPMSQ93062 196 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 YIPF5Q969M3 257 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ELP4Q96EB1 424 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SLC41A3Q96GZ6 507 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 FCRL4Q96PJ5 515 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 MCHR1Q99705 422 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PELOQ9BRX2 385 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF649Q9BS31 505 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 TIMM29Q9BSF4 260 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PLA2G12AQ9BZM1 189 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SPRTNQ9H040 489 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SLITRK2Q9H156 845 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR2AG1Q9H205 316 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 UBQLN3Q9H347 655 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GLIPR2Q9H4G4 154 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 EGLN3Q9H6Z9 239 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 HEXA-AS1Q9H8Q6 139 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 AURKAIP1Q9NWT8 199 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 MED11Q9P086 117 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 KLHL9Q9P2J3 617 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 TAC3Q9UHF0 121 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 POMT2Q9UKY4 750 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 RASD1Q9Y272 281 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 HEBP2Q9Y5Z4 205 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 LRRK1Q38SD2 2015 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 A0A1W2PPL8 197 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 RPS10-NUDT3A0A1W2PQS6 291 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 A0A1W2PRG6 482 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 hCG_1807616A0A1W2PRN6 198 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 LRIT2A6NDA9 550 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CD8B2A6NJW9 211 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 SLC9B1P1A6NJY1 282 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 NTN3O00634 580 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 BHLHE40O14503 412 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OGG1O15527 345 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 EEF1E1O43324 174 aaKnown RBP5.36□□□□□ -1.55
VPS33B-203ENST00000554264 AKR7A2O43488 359 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 OR1F1O43749 312 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 TMPRSS11DO60235 418 aa5.36□□□□□ -1.55
VPS33B-203ENST00000554264 CREBL2O60519 120 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms