RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 LRR1Q96L50 414 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 LRRC37BQ96QE4 947 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 OR52B2Q96RD2 323 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 PAIP1Q9H074 479 aaKnown RBP8.53□□□□□ -1.04
ACTN1-208ENST00000553370 LRMDAQ9H2I8 198 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 DENND2DQ9H6A0 471 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-208ENST00000553370 TREM2Q9NZC2 230 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 ADAM30Q9UKF2 790 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 USH1CQ9Y6N9 552 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
ACTN1-208ENST00000553370 SLC22A23A1A5C7 686 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 MCIDASD6RGH6 385 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 KPNA4O00629 521 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 HPRP00739 348 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 HPXP02790 462 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 BGLAPP02818 100 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 NAT2P11245 290 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 KLF3P57682 345 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 CLRN1P58418 232 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 MAGOHP61326 146 aaKnown RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 PLP2Q04941 152 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 RUNX1T1Q06455 604 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 RBBP4Q09028 425 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 TBC1D28Q2M2D7 210 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 C3orf56Q8N813 242 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 SLC30A7Q8NEW0 376 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 OR5J2Q8NH18 312 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 SLC26A7Q8TE54 656 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 DYDC1Q8WWB3 177 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 GCDHQ92947 438 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 ZNF566Q969W8 418 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 RAB39BQ96DA2 213 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 SPDL1Q96EA4 605 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 TXNDC15Q96J42 360 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 MAELQ96JY0 434 aaKnown RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 MOGAT1Q96PD6 335 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 JMJD8Q96S16 334 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 TCF7L2Q9NQB0 619 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 ZNF275Q9NSD4 429 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 DECR2Q9NUI1 292 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.05
ACTN1-208ENST00000553370 CCDC167Q9P0B6 97 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 CHST2Q9Y4C5 530 aa8.52□□□□□ -1.05
ACTN1-208ENST00000553370 IGKV1D-42A0A075B6H8 117 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 A0A0A6YYJ9 748 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TRAV20A0A0B4J274 112 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 A0A0B4J2E0 115 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 LOC102725191A0A1B0GVB3 256 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 IQCMA0A1B0GVH7 501 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 A0A1B0GX12 115 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TMEM129A0AVI4 362 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 CPSF4LA6NMK7 179 aaKnown RBP8.51□□□□□ -1.05
ACTN1-208ENST00000553370 MS4A18H0YCH9 400 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TRIM77I1YAP6 450 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 M0R3H8 397 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 CDC14BO60729 498 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 PNPP00491 289 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 PTHP01270 115 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 OR8G3PP0DMU2 310 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ANPEPP15144 967 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ZNF14P17017 642 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-208ENST00000553370 RAD52P43351 418 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ZNF84P51523 738 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 SEC24CP53992 1094 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 CDH12P55289 794 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TEKQ02763 1124 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 MVKQ03426 396 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 HSF2Q03933 536 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 GLO1Q04760 184 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 MELKQ14680 651 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 MS4A18Q3C1V0 323 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 SLC36A2Q495M3 483 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ELFN2Q5R3F8 820 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TTC33Q6PID6 262 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-208ENST00000553370 SLC35D2Q76EJ3 337 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ZNF771Q7L3S4 317 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-208ENST00000553370 SLC16A14Q7RTX9 510 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 NANOGNBQ7Z5D8 188 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 PXKQ7Z7A4 578 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 LRP11Q86VZ4 500 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 BPIFB2Q8N4F0 458 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 SMYD1Q8NB12 490 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 HIPK4Q8NE63 616 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 OR1J2Q8NGS2 313 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 VANGL1Q8TAA9 524 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-208ENST00000553370 SYNPRQ8TBG9 265 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 LRRC8CQ8TDW0 803 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ZMYND19Q96E35 227 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TIMD4Q96H15 378 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 MCHR1Q99705 422 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 TMEM43Q9BTV4 400 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 KCNN2Q9H2S1 579 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 C1orf198Q9H425 327 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 ZNF385DQ9H6B1 395 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 EVA1AQ9H8M9 152 aa8.51□□□□□ -1.05
ACTN1-208ENST00000553370 NANSQ9NR45 359 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms