RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 CT62P0C5K7 136 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 EIF1AXP47813 144 aaKnown RBP10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 ZNF658BQ4V348 819 aaPredicted RBP10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 OR2W3Q7Z3T1 314 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 OR10Z1Q8NGY1 313 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 PPP1R1CQ8WVI7 109 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 PHYHIPQ92561 330 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 GAL3ST4Q96RP7 486 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 SARGQ9BW04 601 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 TBC1D29Q9UFV1 150 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 SERGEFQ9UGK8 458 aa10.57□□□□□ -0.72
PPFIA2-227ENST00000552948 RFPL4AA6NLU0 287 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 RFPL4AL1F8VTS6 287 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 H0YGG7 62 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 XRCC3O43542 346 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SRPX2O60687 465 aaPredicted RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 PTP4A3O75365 173 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 OR2A4O95047 310 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 GLAP06280 429 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 MGMTP16455 207 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 AVPR2P30518 371 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 EPHA4P54764 986 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 TAS2R19P59542 299 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 ARF3P61204 181 aaPredicted RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SNRPNP63162 240 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SMCO1Q147U7 214 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 UBXN2BQ14CS0 331 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 GLYATL3Q5SZD4 288 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 STPG1Q5TH74 334 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 STOML3Q8TAV4 291 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 OR2A7Q96R45 310 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 MYADMQ96S97 322 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 MRI1Q9BV20 369 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC6A17Q9H1V8 727 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 HAO2Q9NYQ3 351 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 ZNF337Q9Y3M9 751 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 ETV7Q9Y603 341 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 TMEM235A6NFC5 223 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC25A12O75746 678 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 ADRA2CP18825 462 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 HTRA4P83105 476 aaPredicted RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 TMEM71Q6P5X7 295 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 RAB11FIP2Q7L804 512 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 TMED6Q8WW62 240 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 DMRTA2Q96SC8 542 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 LRIT1Q9P2V4 623 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 RNGTTO60942 597 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 AK1P00568 194 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 CISD3P0C7P0 127 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 CDKN2AP42771 156 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 METTL21AQ8WXB1 218 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 ATOH1Q92858 354 aaPredicted RBP10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 PPP1R14AQ96A00 147 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 COX14Q96I36 57 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 OR2M4Q96R27 311 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 CRB3Q9BUF7 120 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC17A9Q9BYT1 436 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 FGF22Q9HCT0 170 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 TMEM74BQ9NUR3 256 aa10.56□□□□□ -0.72
PPFIA2-227ENST00000552948 SGCEO43556 437 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ITGB8P26012 769 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 BDKRB2P30411 391 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 S100A10P60903 97 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 RIPPLY1Q0D2K3 151 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 RBM39Q14498 530 aaKnown RBP10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 MEP1BQ16820 701 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ZNF542PQ5EBM4 170 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 MANEAQ5SRI9 462 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 LILRA6Q6PI73 481 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 CSNK1A1LQ8N752 337 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 OR5T2Q8NGG2 359 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 OR9A4Q8NGU2 314 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 OR6N1Q8NGY5 312 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 OR2G2Q8NGZ5 317 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC25A28Q96A46 364 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 TMPRSS13Q9BYE2 586 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 WDR76Q9H967 626 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 HRASLS2Q9NWW9 162 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 FRRS1LQ9P0K9 344 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ENTPD2Q9Y5L3 495 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 HEBP2Q9Y5Z4 205 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 OTOL1A6NHN0 477 aaPredicted RBP10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 BRINP1O60477 761 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 CTSVO60911 334 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 AQP8O94778 261 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 PMS2P2O95744 297 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ERGP11308 486 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ATP1B3P54709 279 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ZNF615Q8N8J6 731 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 OR6K3Q8NGY3 331 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 SLC25A44Q96H78 314 aaPredicted RBP10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 GFI1Q99684 422 aa10.55□□□□□ -0.72
PPFIA2-227ENST00000552948 ZFYVE21Q9BQ24 234 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms