RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 MSMPQ1L6U9 139 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 OR2T12Q8NG77 320 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 NEU4Q8WWR8 484 aaPredicted RBP14.09□□□□□ -0.15
VPS29-207ENST00000549970 ZNF347Q96SE7 839 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 SH3GL3Q99963 347 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 BPESC1Q9GZL8 116 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 POLR2J2Q9GZM3 115 aaKnown RBP14.09□□□□□ -0.15
VPS29-207ENST00000549970 POLR2J3Q9H1A7 115 aaKnown RBP14.09□□□□□ -0.15
VPS29-207ENST00000549970 TPK1Q9H3S4 243 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 DENND2DQ9H6A0 471 aaPredicted RBP14.09□□□□□ -0.15
VPS29-207ENST00000549970 FBN1P35555 2871 aaKnown RBP14.09□□□□□ -0.15
VPS29-207ENST00000549970 MALRD1Q5VYJ5 2156 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 A0A1W2PRG6 482 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 ELOVL7A1L3X0 281 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 FARS2O95363 451 aaKnown RBP14.08□□□□□ -0.16
VPS29-207ENST00000549970 ADRA2AP08913 450 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 OR8G3PP0DMU2 310 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 APEHP13798 732 aaKnown RBP14.08□□□□□ -0.16
VPS29-207ENST00000549970 DAOP14920 347 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 GLRXP35754 106 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 AQP2P41181 271 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 GZMKP49863 264 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 HSP90B2PQ58FF3 399 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 ZNF584Q8IVC4 421 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 MICU2Q8IYU8 434 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 SYT14Q8NB59 555 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 MCHR2Q969V1 340 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 MRPL24Q96A35 216 aaKnown RBP14.08□□□□□ -0.16
VPS29-207ENST00000549970 SYT3Q9BQG1 590 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 MRPL37Q9BZE1 423 aaKnown RBP14.08□□□□□ -0.16
VPS29-207ENST00000549970 INIPQ9NRY2 104 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 GMPR2Q9P2T1 348 aaKnown RBP14.08□□□□□ -0.16
VPS29-207ENST00000549970 FBXL3Q9UKT7 428 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 FZR1Q9UM11 496 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 MED31Q9Y3C7 131 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 ATRQ13535 2644 aa14.08□□□□□ -0.16
VPS29-207ENST00000549970 PIP5K1CO60331 668 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 ENTPD5O75356 428 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 STAMBPO95630 424 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 IGFBP1P08833 259 aaPredicted RBP14.07□□□□□ -0.16
VPS29-207ENST00000549970 LSP1P33241 339 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 ZNF540Q8NDQ6 660 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 NOXO1Q8NFA2 376 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 OR4K5Q8NGD3 323 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 MOSPD2Q8NHP6 518 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 ASB10Q8WXI3 467 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 CCDC134Q9H6E4 229 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 RNF121Q9H920 327 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 CHODLQ9H9P2 273 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 CMTM6Q9NX76 183 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 CDC42EP3Q9UKI2 254 aa14.07□□□□□ -0.16
VPS29-207ENST00000549970 M0R233 179 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 SLC22A2O15244 555 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 LMX1BO60663 402 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
VPS29-207ENST00000549970 IGF2P01344 180 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 IFNA2P01563 188 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 SERPINA5P05154 406 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 THRBP10828 461 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 YAP1P46937 504 aaKnown RBP14.06□□□□□ -0.16
VPS29-207ENST00000549970 DAP3P51398 398 aaKnown RBP14.06□□□□□ -0.16
VPS29-207ENST00000549970 ZNF84P51523 738 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 RPS23P62266 143 aaKnown RBP14.06□□□□□ -0.16
VPS29-207ENST00000549970 SELENOWP63302 87 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 ST3GAL3Q11203 375 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 TMEM53Q6P2H8 277 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
VPS29-207ENST00000549970 SLC16A14Q7RTX9 510 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 HDDC2Q7Z4H3 204 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 LRP11Q86VZ4 500 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 RP9Q8TA86 221 aaKnown RBP14.06□□□□□ -0.16
VPS29-207ENST00000549970 LZICQ8WZA0 190 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 PRRC1Q96M27 445 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 BEX2Q9BXY8 128 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 REV1Q9UBZ9 1251 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 SLC7A8Q9UHI5 535 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 A4GNTQ9UNA3 340 aa14.06□□□□□ -0.16
VPS29-207ENST00000549970 LOC100289279A0A1B0GTE1 492 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 LRP5LA4QPB2 252 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 SYNGR3O43761 229 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 FAM157BP0CG42 384 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 FAM157CP0CG43 387 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 CCL2P13500 99 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 ACADSP16219 412 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 ZNF23P17027 643 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 TCN1P20061 433 aaPredicted RBP14.05□□□□□ -0.16
VPS29-207ENST00000549970 IFNA8P32881 189 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 ALDH3B1P43353 468 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 EVX1P49640 407 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 LAPTM4AQ15012 233 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 MAD2L1BPQ15013 274 aaPredicted RBP14.05□□□□□ -0.16
VPS29-207ENST00000549970 FXNQ16595 210 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 HIST3H3Q16695 136 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 SLC36A2Q495M3 483 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 FAM166AQ6J272 317 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 ARPINQ7Z6K5 226 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 VTCN1Q7Z7D3 282 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 SLC15A3Q8IY34 581 aa14.05□□□□□ -0.16
VPS29-207ENST00000549970 ZNF786Q8N393 782 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms