RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 WDR74Q6RFH5 385 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 SPNS3Q6ZMD2 512 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 ABHD12BQ7Z5M8 362 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 TMEM86AQ8N2M4 240 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 MTURNQ8N3F0 131 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 LRRC52Q8N7C0 313 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 OR51G1Q8NGK1 321 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 OR2T34Q8NGX1 318 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 SCFD1Q8WVM8 642 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 RPUSD4Q96CM3 377 aaKnown RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 ELMO2Q96JJ3 720 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 TIPINQ9BVW5 301 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 DDX47Q9H0S4 455 aaKnown RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 MAGT1Q9H0U3 335 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 RSPH9Q9H1X1 276 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 NEUROG2Q9H2A3 272 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 LHX5Q9H2C1 402 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 GPN2Q9H9Y4 310 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 SCML1Q9UN30 329 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 TEX264Q9Y6I9 313 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 PRRC2CQ9Y520 2896 aaKnown RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 ACANP16112 2415 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 PTPRJQ12913 1337 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CCDC169A6NNP5 214 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 H3BTX0 84 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 HUS1O60921 280 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CTDNEP1O95476 244 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CSF2P04141 144 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 ABHD2P08910 425 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 WARSP23381 471 aaKnown RBP2.45□□□□□ -2.02
SNHG1-224ENST00000545688 PTPN6P29350 595 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 LONP1P36776 959 aaKnown RBP2.45□□□□□ -2.02
SNHG1-224ENST00000545688 NUMBP49757 651 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 GTF2BQ00403 316 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 IL23RQ5VWK5 629 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 IGFL1Q6UW32 110 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 FAM159AQ6UWV7 190 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CYS1Q717R9 158 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 C10orf53Q8N6V4 93 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 PIGCQ92535 297 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 MYLPFQ96A32 169 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 FAM210BQ96KR6 192 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CCDC43Q96MW1 224 aaKnown RBP2.45□□□□□ -2.02
SNHG1-224ENST00000545688 SPATA13Q96N96 652 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 FOPNLQ96NB1 174 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 BBS2Q9BXC9 721 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 SRXN1Q9BYN0 137 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 COMMD4Q9H0A8 199 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 RWDD1Q9H446 243 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CSNK1G1Q9HCP0 422 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 BTNL2Q9UIR0 455 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 STOML2Q9UJZ1 356 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 CDH9Q9ULB4 789 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 PLA2G4CQ9UP65 541 aa2.45□□□□□ -2.02
SNHG1-224ENST00000545688 EIF3LQ9Y262 564 aaKnown RBP2.45□□□□□ -2.02
SNHG1-224ENST00000545688 ANK3Q12955 4377 aaKnown RBP2.45□□□□□ -2.02
SNHG1-224ENST00000545688 JMJD1CQ15652 2540 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 PKDREJQ9NTG1 2253 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 IGHV3-64DA0A0J9YX35 117 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 E9PMD0 336 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 K7EM74 188 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 PES1O00541 588 aaKnown RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 NEMFO60524 1076 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 NDUFA7O95182 113 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 GOSR1O95249 250 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 IGKV1-17P01599 117 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 SLC4A1P02730 911 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 KRT7P08729 469 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 XRCC1P18887 633 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 CD82P27701 267 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 ACOT2P49753 483 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 CSNK1G2P78368 415 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 KLRB1Q12918 225 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 SLAQ13239 276 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 HNRNPA1L2Q32P51 320 aaKnown RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 C9orf64Q5T6V5 341 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 GUSBP11Q6P575 273 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 ACP7Q6ZNF0 438 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 TPGS1Q6ZTW0 290 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 SCD5Q86SK9 330 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 TRIM69Q86WT6 500 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 ZSCAN4Q8NAM6 433 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 ZNF596Q8TC21 504 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 IL1F10Q8WWZ1 152 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 DEDD2Q8WXF8 326 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 FBXO32Q969P5 355 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 BMFQ96LC9 184 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 CATSPER2Q96P56 530 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 KCNK16Q96T55 309 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 MCHR1Q99705 422 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 MRPL45Q9BRJ2 306 aaKnown RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 POLR2J2Q9GZM3 115 aaKnown RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 POLR2J3Q9H1A7 115 aaKnown RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 PPDPFQ9H3Y8 114 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 FBXL12Q9NXK8 326 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 UTP6Q9NYH9 597 aaKnown RBP2.44□□□□□ -2.02
SNHG1-224ENST00000545688 SUN2Q9UH99 717 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 CYTH4Q9UIA0 394 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 DOCK9Q9BZ29 2069 aa2.44□□□□□ -2.02
SNHG1-224ENST00000545688 COL6A5A8TX70 2615 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms