RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 CHMP1BQ7LBR1 199 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 RANBP3LQ86VV4 465 aaPredicted RBP3.94□□□□□ -1.78
MDM2-228ENST00000542502 PGAM4Q8N0Y7 254 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 CLIP4Q8N3C7 705 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ST6GALNAC3Q8NDV1 305 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 CATSPER1Q8NEC5 780 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 OR2T12Q8NG77 320 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 OR4N2Q8NGD1 307 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 OR52E4Q8NGH9 312 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 OR4C3Q8NH37 302 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 OR52P1PQ8NH57 321 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 OR5W2Q8NH69 310 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 FBXO30Q8TB52 745 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 GRHL3Q8TE85 626 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 DUSP19Q8WTR2 217 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 TMEM170AQ8WVE7 144 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 PIK3R3Q92569 461 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 PROX1Q92786 737 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 EFHD2Q96C19 240 aaPredicted RBP3.94□□□□□ -1.78
MDM2-228ENST00000542502 NTNG2Q96CW9 530 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 RCN3Q96D15 328 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ARSGQ96EG1 525 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ZNF559Q9BR84 538 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 GPATCH1Q9BRR8 931 aaKnown RBP3.94□□□□□ -1.78
MDM2-228ENST00000542502 C1QTNF4Q9BXJ3 329 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 PINK1Q9BXM7 581 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 TRIM15Q9C019 465 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 TRIM4Q9C037 500 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 LAT2Q9GZY6 243 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ZDHHC11Q9H8X9 412 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 C12orf10Q9HB07 376 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 KLHL1Q9NR64 748 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 SERINC1Q9NRX5 453 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ANKRD10Q9NXR5 420 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ADA2Q9NZK5 511 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ARMCX1Q9P291 453 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ABCD2Q9UBJ2 740 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 RPS6KA6Q9UK32 745 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 DKKL1Q9UK85 242 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 SAMD4AQ9UPU9 718 aaKnown RBP3.94□□□□□ -1.78
MDM2-228ENST00000542502 SLC9A8Q9Y2E8 581 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 C15orf41Q9Y2V0 281 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 ESPL1Q14674 2120 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 DSPPQ9NZW4 1301 aa3.94□□□□□ -1.78
MDM2-228ENST00000542502 CENPEQ02224 2701 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 EML6Q6ZMW3 1958 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TRGV5A0A0B4J1U4 118 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 A0A0B4J293 547 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 ANKUB1A6NFN9 424 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CFAP73A6NFT4 308 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 FAM220BPB1ANY3 271 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 FAM157AC9JC47 383 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 C9JVG2 144 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 GYG2O15488 501 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 HCRTR2O43614 444 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CDC40O60508 579 aaKnown RBP eCLIP3.93□□□□□ -1.782e-6■■□□□ 11.6
MDM2-228ENST00000542502 WDR1O75083 606 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 UGT2B17O75795 530 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TRAPPC6AO75865 159 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SEC14L2O76054 403 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 NUDT14O95848 222 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 IGHG3P01860 377 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 BCHEP06276 602 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CCL3P10147 92 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 THRBP10828 461 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 PNMTP11086 282 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 GP1BBP13224 206 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CPN1P15169 458 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 EDN2P20800 178 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 RPS4Y1P22090 263 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 DPP4P27487 766 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 HTR1EP28566 365 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CPOXP36551 454 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 APOBEC1P41238 236 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 SLC7A2P52569 658 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SMIM11AP58511 58 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 PSME3P61289 254 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 GABPB1Q06547 395 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 GK3PQ14409 553 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TOMM20Q15388 145 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TAF11Q15544 211 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SYPL1Q16563 259 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 ZNF672Q499Z4 452 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 NADK2Q4G0N4 442 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SLC25A53Q5H9E4 307 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 PDZK1Q5T2W1 519 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 WLSQ5T9L3 541 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 WBP2NLQ6ICG8 309 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TMEM211Q6ICI0 200 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 OR2A2Q6IF42 318 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TYW3Q6IPR3 259 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 GFRALQ6UXV0 394 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 FRRS1Q6ZNA5 592 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CCDC121Q6ZUS5 278 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 IGFN1Q86VF2 1251 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CYP4Z1Q86W10 505 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 IFNEQ86WN2 208 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 CALHM3Q86XJ0 350 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 ZGRF1Q86YA3 2104 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms