RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
DDX55-209ENST00000542286 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
DDX55-209ENST00000542286 TUBAL3A6NHL2 446 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 G3V3Q6 166 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ZNF354AO60765 605 aaPredicted RBP13.38□□□□□ -0.27
DDX55-209ENST00000542286 RGS11O94810 467 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 TMIGD3P0DMS9 266 aaPredicted RBP13.38□□□□□ -0.27
DDX55-209ENST00000542286 SRFP11831 508 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 SRMP19623 302 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 TAS2R43P59537 309 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ZP1P60852 638 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 OPCMLQ14982 345 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ZSWIM7Q19AV6 140 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 C14orf28Q4W4Y0 310 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 LIPNQ5VXI9 398 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 TMPRSS9Q7Z410 1059 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 SLC35F3Q8IY50 421 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 CMTM4Q8IZR5 234 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ADAMTS14Q8WXS8 1223 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 PMM1Q92871 262 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ADIPOR1Q96A54 375 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 SFXN2Q96NB2 322 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 LDAHQ9H6V9 325 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 PRODH2Q9UF12 536 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 H3BMH7 237 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 FBXO45P0C2W1 286 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 SELENOPP49908 381 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 SKP1P63208 163 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 TDGQ13569 410 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 MEP1BQ16820 701 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 SFRP4Q6FHJ7 346 aaPredicted RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 FCRLAQ7L513 359 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 MDGA2Q7Z553 956 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 LRRC75AQ8NAA5 344 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 THEM6Q8WUY1 208 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 LCORQ96JN0 433 aaPredicted RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 CXorf58Q96LI9 332 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 DPYSL5Q9BPU6 564 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GTF2A1LQ9UNN4 478 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 FLVCR2Q9UPI3 526 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 KIF26BQ2KJY2 2108 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 SHISA8B8ZZ34 492 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GLCEO94923 617 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 IL33O95760 270 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 WNT11O96014 354 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 MAS1P04201 325 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 CD14P08571 375 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 H2AFB2P0C5Z0 115 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GAAP10253 952 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 RBMS1P29558 406 aaKnown RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 TSPAN5P62079 268 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 POU4F2Q12837 409 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 C3P1Q6ZMU1 363 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 NLRC3Q7RTR2 1065 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 STPG2Q8N412 459 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 SLC25A45Q8N413 288 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 TOMM5Q8N4H5 51 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 POMGNT2Q8NAT1 580 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 FAM71CQ8NEG0 241 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GPR119Q8TDV5 335 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 ZNF436Q9C0F3 470 aaPredicted RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 FRRS1LQ9P0K9 344 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GRHPRQ9UBQ7 328 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GLS2Q9UI32 602 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 ZNF175Q9Y473 711 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 CACNA1EQ15878 2313 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 IGHV1OR21-1A0A087WYE8 117 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 LILRA5A6NI73 299 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 KRBOX1C9JBD0 128 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 LMO7DNF2Z398 122 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 H0YIG0 161 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 HPXP02790 462 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 IGKV3-11P04433 115 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 UCHL1P09936 223 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GALP22466 123 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 RORAP35398 523 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 PPICP45877 212 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 CBX5P45973 191 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 ACTA2P62736 377 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 ACTG2P63267 376 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 LGALS3BPQ08380 585 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 MELKQ14680 651 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 SMAD2Q15796 467 aaKnown RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 RPL22L1Q6P5R6 122 aaKnown RBP13.37□□□□□ -0.27
DDX55-209ENST00000542286 TSSK4Q6SA08 328 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 LINGO2Q7L985 606 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 GAL3ST1Q99999 423 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 KCNG2Q9UJ96 466 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 HIF3AQ9Y2N7 669 aa13.37□□□□□ -0.27
DDX55-209ENST00000542286 CCDC85CA6NKD9 419 aa13.36□□□□□ -0.27
DDX55-209ENST00000542286 ARPC3O15145 178 aa13.36□□□□□ -0.27
DDX55-209ENST00000542286 HLA-DQA2P01906 255 aa13.36□□□□□ -0.27
DDX55-209ENST00000542286 OPN1LWP04000 364 aa13.36□□□□□ -0.27
DDX55-209ENST00000542286 ASAH2BP0C7U1 165 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms