RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 HOXB5P09067 269 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 ZNF16P17020 682 aaPredicted RBP14.69□□□□□ -0.06
VARS2-212ENST00000542001 PI3P19957 117 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 GZMKP49863 264 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 CHRFAM7AQ494W8 412 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 BAIAP2L2Q6UXY1 529 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 WDR88Q6ZMY6 472 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 FAM3DQ96BQ1 224 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 SMIM3Q9BZL3 60 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 BANF2Q9H503 90 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 EMC7Q9NPA0 242 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 TMEM74BQ9NUR3 256 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 OBP2AQ9NY56 170 aa14.69□□□□□ -0.06
VARS2-212ENST00000542001 ZNF236Q9UL36 1845 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 FAM230AA0A1W2PPH8 454 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 EFCAB7A8K855 629 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 BCAT2O15382 392 aaPredicted RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 PLA2G10O15496 165 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 IGHV3-9P01782 118 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 TBXA2RP21731 343 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 GABRR1P24046 479 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 RFX2P48378 723 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 IL13RA1P78552 427 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 HSD11B2P80365 405 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 AIMP2Q13155 320 aaKnown RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 UBE2NLQ5JXB2 153 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 SHDQ96IW2 340 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 MNTQ99583 582 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 LRRC61Q9BV99 259 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 RNF32Q9H0A6 362 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 MEPEQ9NQ76 525 aaPredicted RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 FLRT3Q9NZU0 649 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 CAMK2AQ9UQM7 478 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 MDC1Q14676 2089 aaKnown RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 ZNF850A8MQ14 1090 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 SCRG1O75711 98 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 RLN2P04090 185 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 LCATP04180 440 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 SERPINA2P20848 420 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 CRABP1P29762 137 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 AKR1C2P52895 323 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 ACTBP60709 375 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 ACTG1P63261 375 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 CSNK2A1P68400 391 aaPredicted RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 AKR1C1Q04828 323 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 ZIC1Q15915 447 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 ZNF770Q6IQ21 691 aaPredicted RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 CSNK2A3Q8NEV1 391 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 SMIM19Q96E16 107 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 IL33O95760 270 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 AKAIN1P0CW23 69 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 RBM34P42696 430 aaKnown RBP14.68□□□□□ -0.06
VARS2-212ENST00000542001 C21orf58P58505 322 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 OPCMLQ14982 345 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 SLC36A2Q495M3 483 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 ZNF321PQ8N8H1 164 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 MLXQ9UH92 298 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 NPFFR2Q9Y5X5 522 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 AKAP6Q13023 2319 aa14.68□□□□□ -0.06
VARS2-212ENST00000542001 CBX7O95931 251 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 GPLD1P80108 840 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 WBP1LQ9NX94 342 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 TAS2R4Q9NYW5 299 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 LAMA2P24043 3122 aaKnown RBP14.67□□□□□ -0.06
VARS2-212ENST00000542001 A0A0A6YYH2 397 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 SPTY2D1-AS1A0A0U1RR47 76 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 TLCD2A6NGC4 264 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 A6NJ64 397 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 TP53I11O14683 189 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 CBX5P45973 191 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 SLC6A8P48029 635 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 DLX5P56178 289 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 PRSS12P56730 875 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 PLGLB1Q02325 96 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 FAM53BQ14153 422 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 C17orf107Q6ZR85 190 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ZNF546Q86UE3 836 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 OR51T1Q8NGJ9 327 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ZNF681Q96N22 645 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 SLCO1C1Q9NYB5 712 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 CTSFQ9UBX1 484 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 C19orf25Q9UFG5 118 aaPredicted RBP14.67□□□□□ -0.06
VARS2-212ENST00000542001 B3GALT1Q9Y5Z6 326 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 IFITM5A6NNB3 132 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 C17orf51A8MQB3 221 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 TNFRSF10AO00220 468 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 DPM1O60762 260 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 FARS2O95363 451 aaKnown RBP14.67□□□□□ -0.06
VARS2-212ENST00000542001 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
VARS2-212ENST00000542001 TNK1Q13470 666 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ETFDHQ16134 617 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ZNF628Q5EBL2 1059 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 C1orf140Q5VVS0 124 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 MRM1Q6IN84 353 aaKnown RBP14.67□□□□□ -0.06
VARS2-212ENST00000542001 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 CCDC36Q8IYA8 594 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 OR14L1PQ8NHC6 308 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ST6GAL2Q96JF0 529 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ZNF700Q9H0M5 742 aa14.67□□□□□ -0.06
VARS2-212ENST00000542001 ZNF160Q9HCG1 818 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms