RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CT45A8P0DMV1 189 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CT45A9P0DMV2 189 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 LAP3P28838 519 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 BPIFB3P59826 476 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SELENOWP63302 87 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF239Q16600 458 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CT45A2Q5DJT8 189 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 OR2G6Q5TZ20 316 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 GGNBP1Q5YKI7 109 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 LCN10Q6JVE6 187 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SLCO4C1Q6ZQN7 724 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 DCXRQ7Z4W1 244 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 OR5AP2Q8NGF4 316 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 HUS1BQ8NHY5 278 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NEK7Q8TDX7 302 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 MR1Q95460 341 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 VOPP1Q96AW1 172 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 BMFQ96LC9 184 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SLIRPQ9GZT3 109 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PTPRSQ13332 1948 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PLXNB3Q9ULL4 1909 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF208O43345 1280 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NUDT21O43809 227 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF8P17098 575 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ITGB8P26012 769 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CMPK1P30085 196 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 GDNFP39905 211 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TAS2R60P59551 318 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CBX2Q14781 532 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PRAMEF14Q5SWL7 426 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NXPE4Q6UWF7 544 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 AMZ2Q86W34 360 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NAGSQ8N159 534 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 FAM24BQ8N5W8 94 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF485Q8NCK3 441 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 METTL21AQ8WXB1 218 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PRAP1Q96NZ9 151 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CHRDL1Q9BU40 450 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ADAT1Q9BUB4 502 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SMG9Q9H0W8 520 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 OR2AG1Q9H205 316 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SLC17A5Q9NRA2 495 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZDHHC8Q9ULC8 765 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 YTHDF2Q9Y5A9 579 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 KIF26AQ9ULI4 1882 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TRAV18A0A075B6X5 111 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF823P16415 610 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SOX18P35713 384 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 GDF5P43026 501 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TSFMP43897 325 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 DAPP51397 102 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF91Q05481 1191 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ACSM1Q08AH1 577 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF658BQ4V348 819 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 C9orf64Q5T6V5 341 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 BVESQ8NE79 360 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 MS4A3Q96HJ5 214 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 RHNO1Q9BSD3 238 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 LINC00597Q9H2U6 94 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TAS2R5Q9NYW4 299 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 FLVCR2Q9UPI3 526 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 HCFC2Q9Y5Z7 792 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SAP18O00422 153 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 MAS1P04201 325 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ATP1B1P05026 303 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 HOXB9P17482 250 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NDUFB7P17568 137 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TAS2R46P59540 309 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TMEM35AQ53FP2 167 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SFRP5Q5T4F7 317 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF776Q68DI1 518 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 GLB1L2Q8IW92 636 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PNPLA1Q8N8W4 532 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NLGN4YQ8NFZ3 816 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 UCN3Q969E3 161 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ELSPBP1Q96BH3 223 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SLC25A44Q96H78 314 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 COX14Q96I36 57 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ATF6BQ99941 703 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 METTL9Q9H1A3 318 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NDUFB11Q9NX14 153 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF586Q9NXT0 402 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 NDRG4Q9ULP0 352 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 DENND4AQ7Z401 1863 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 RAB29O14966 203 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CTSLP07711 333 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ERGP11308 486 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 FBLP22087 321 aaKnown RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 AVPR2P30518 371 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF84P51523 738 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PDE7AQ13946 482 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CLEC2AQ6UVW9 174 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SUSD1Q6UWL2 747 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 CEACAM20Q6UY09 585 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 GRINAQ7Z429 371 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 OR6K3Q8NGY3 331 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TMED6Q8WW62 240 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SCAMP4Q969E2 229 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 TEX37Q96LM6 180 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms