RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 POFUT2Q9Y2G5 429 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 LRP4O75096 1905 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 A0A1W2PR80 420 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 ZNF729A6NN14 1252 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 MARCH11A6NNE9 402 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 ZNF587BE7ETH6 402 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 F12P00748 615 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 SMIM10L1P0DMW3 83 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 APOBEC3AP31941 199 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 CLDN20P56880 219 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 GLO1Q04760 184 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 DNAL1Q4LDG9 190 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 CROCCP2Q86T23 111 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 CARM1Q86X55 608 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 TGIF2LXQ8IUE1 241 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 TUSC5Q8IXB3 177 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 LRRC56Q8IYG6 542 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 PARP8Q8N3A8 854 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 RNF175Q8N4F7 328 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 SLC25A43Q8WUT9 341 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 SMIM10Q96HG1 83 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 PIGUQ9H490 435 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 EML4Q9HC35 981 aaKnown RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 ABCD2Q9UBJ2 740 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 ZNF223Q9UK11 482 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 ZNF346Q9UL40 294 aaKnown RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 AMDHD2Q9Y303 409 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 FREM3P0C091 2139 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 H0YIV9 168 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 AQP8O94778 261 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 PLAUP00749 431 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 HCKP08631 526 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 CD79AP11912 226 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 ZNF708P17019 499 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 IMPDH1P20839 514 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 SLC6A12P48065 614 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 CBFBQ13951 182 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 OR4F6Q8NGB9 312 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 ZFAND1Q8TCF1 268 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 CHAC2Q8WUX2 184 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 KCTD14Q9BQ13 255 aaPredicted RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 DUSP26Q9BV47 211 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 PTDSS2Q9BVG9 487 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 MS4A5Q9H3V2 200 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.75□□□□□ -1.33
GNE-205ENST00000539815 WARS2Q9UGM6 360 aaKnown RBP6.75□□□□□ -1.33
GNE-205ENST00000539815 CMAHPQ9Y471 501 aa6.75□□□□□ -1.33
GNE-205ENST00000539815 SAC3D1A6NKF1 404 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 NDUFS8O00217 210 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 GSTA4O15217 222 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 SLC22A5O76082 557 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 FBP1P09467 338 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 CBR1P16152 277 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 GMPRP36959 345 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 YAP1P46937 504 aaKnown RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 LIMS1P48059 325 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 IDH3GP51553 393 aaPredicted RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 FUT7Q11130 342 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 ADPRMQ3LIE5 342 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 LCN1P1Q5VSP4 162 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 ZFP1Q6P2D0 407 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 ZNF474Q6S9Z5 364 aaPredicted RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 MIER2Q8N344 545 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 SLC25A36Q96CQ1 311 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 SPATA9Q9BWV2 254 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 JAM3Q9BX67 310 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 CDC42EP4Q9H3Q1 356 aaKnown RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 PLK3Q9H4B4 646 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 HSPB11Q9Y547 144 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 PLOD3O60568 738 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 SCAF4O95104 1147 aaKnown RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 RAB36O95755 333 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 IGKV3-11P04433 115 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 IL12AP29459 219 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 TIA1P31483 386 aaKnown RBP eCLIP6.74□□□□□ -1.33
GNE-205ENST00000539815 KIR2DL2P43627 348 aaPredicted RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 PKNOX1P55347 436 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 GLYR1Q49A26 553 aaPredicted RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 TMEM236Q5W0B7 351 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 TTC33Q6PID6 262 aaPredicted RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 LAS2Q8IYD9 372 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 ZNF525Q8N782 197 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 ZNF671Q8TAW3 534 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 C2CD4CQ8TF44 421 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 PROX1Q92786 737 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 RAB1CQ92928 201 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 C1GALT1C1Q96EU7 318 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 GPR22Q99680 433 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 PKP2Q99959 881 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 EGLN1Q9GZT9 426 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 GRHL1Q9NZI5 618 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 BAIAP2Q9UQB8 552 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 SPEGQ15772 3267 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 WASHC1A8K0Z3 465 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 OR12D1P0DN82 309 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 NR2F1P10589 423 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 GCH1P30793 250 aa6.74□□□□□ -1.33
GNE-205ENST00000539815 MSX2P35548 267 aaPredicted RBP6.74□□□□□ -1.33
GNE-205ENST00000539815 BAMBIQ13145 260 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms