RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 C2orf16Q68DN1 1984 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 A0A087WUU8 490 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 C17orf113A0A1B0GUU1 675 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 A0A1W2PPC4 97 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 GXYLT2A0PJZ3 443 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 TMEM218A2RU14 115 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ACOD1A6NK06 481 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 J3QLW9 94 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 J3QRE1 110 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 M0R3H8 397 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 GOSR2O14653 212 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OGG1O15527 345 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 BCL2L11O43521 198 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 MOSPD3O75425 235 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 POP7O75817 140 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 SPDEFO95238 335 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ETHE1O95571 254 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 POP4O95707 220 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 RLN2P04090 185 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 RLN1P04808 185 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 FCER2P06734 321 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 GP1BAP07359 652 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 TACSTD2P09758 323 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OR2T7P0C7T2 308 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 GKN3PP0CG01 181 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 AKAIN1P0CW23 69 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OR12D1P0DN82 309 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 TFPIP10646 304 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 FOLR2P14207 255 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ZNF19P17023 458 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 CEBPBP17676 345 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SPI1P17947 270 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 NT5EP21589 574 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ATP5A1P25705 553 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 PAX6P26367 422 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 CERS1P27544 350 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 IMPA1P29218 277 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 CCR2P41597 374 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 FRKP42685 505 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 RAD52P43351 418 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 HAAOP46952 286 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OMPP47874 163 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 RGS8P57771 180 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 ACTBP60709 375 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ACTG1P63261 375 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 BLOC1S1P78537 153 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SNTB1Q13884 538 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 TEAD2Q15562 447 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ZNF77Q15935 545 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 HFEQ30201 348 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 PAN3Q58A45 887 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 IGSF11Q5DX21 431 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 RNASE12Q5GAN4 147 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 CLEC12AQ5QGZ9 265 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 TXNDC8Q6A555 127 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 DMKNQ6E0U4 476 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 OR5M10Q6IEU7 315 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ENPP7Q6UWV6 458 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 IL20RBQ6UXL0 311 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 IL34Q6ZMJ4 242 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ZNF620Q6ZNG0 422 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 Q6ZTK2 550 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 MTSS1LQ765P7 747 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ABHD13Q7L211 337 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 NDUFAF7Q7L592 441 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SZRD1Q7Z422 152 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 ZNF546Q86UE3 836 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 RNF175Q8N4F7 328 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 KCNRGQ8N5I3 272 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OR9A1PQ8NGU1 263 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OR2T27Q8NH04 317 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OR51Q1Q8NH59 317 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 OR4C6Q8NH72 309 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SFT2D1Q8WV19 159 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 THAP4Q8WY91 577 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 NEIL2Q969S2 332 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 INTS12Q96CB8 462 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 ZNF514Q96K75 400 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 HS6ST2Q96MM7 605 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SMIM14Q96QK8 99 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ARHGDIGQ99819 225 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SLC25A21Q9BQT8 299 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 MESP1Q9BRJ9 268 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 RIOK2Q9BVS4 552 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 ACTRT3Q9BYD9 372 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 POTEKPQ9BYX7 375 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 PELI2Q9HAT8 420 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SMCO4Q9NRQ5 59 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 ZCCHC3Q9NUD5 404 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 TMEM74BQ9NUR3 256 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 HCFC1R1Q9NWW0 138 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 SLC25A13Q9UJS0 675 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 CARHSP1Q9Y2V2 147 aaKnown RBP5.98□□□□□ -1.45
USP28-202ENST00000535607 PIKFYVEQ9Y2I7 2098 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 EYSQ5T1H1 3165 aa5.98□□□□□ -1.45
USP28-202ENST00000535607 A0A0G2JK05 382 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 NPIPB15A6NHN6 443 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 OR2AT4A6NND4 320 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms