RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 MRPL24Q96A35 216 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 SLC25A44Q96H78 314 aaPredicted RBP8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 SEPHS2Q99611 448 aa8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 SH3GL1Q99961 368 aa8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 MRPL13Q9BYD1 178 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 BPESC1Q9GZL8 116 aa8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 POLR2J2Q9GZM3 115 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 POLR2J3Q9H1A7 115 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 SAR1AQ9NR31 198 aa8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 MRGBPQ9NV56 204 aa8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 ARGLU1Q9NWB6 273 aaPredicted RBP8.66□□□□□ -1.02
CLSTN3-203ENST00000534830 BBIP1A8MTZ0 92 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 VSTM5A8MXK1 200 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 CENPBD1B2RD01 187 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 RNF13O43567 381 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 LILRA1O75019 489 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 UBL3O95164 117 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 OR6A2O95222 327 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 MT-ND1P03886 318 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ZNF23P17027 643 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 RBM34P42696 430 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 GIPRP48546 466 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 PTDSS1P48651 473 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ARFIP2P53365 341 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 UGT2B15P54855 530 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 PIGFQ07326 219 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 SNTB2Q13425 540 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 MELKQ14680 651 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 CARTPTQ16568 116 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 NRN1LQ496H8 165 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 REP15Q6BDI9 236 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 SPATA21Q7Z572 469 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 CARM1Q86X55 608 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 NKAIN4Q8IVV8 208 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ZNF786Q8N393 782 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 SLC22A24Q8N4F4 322 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ZNF540Q8NDQ6 660 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 SLC26A7Q8TE54 656 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ZFAND2BQ8WV99 257 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ZNF566Q969W8 418 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 ECSITQ9BQ95 431 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 SOX7Q9BT81 388 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 MRPL37Q9BZE1 423 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 TMEM38BQ9NVV0 291 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 TMEFF2Q9UIK5 374 aaPredicted RBP8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 FBXL3Q9UKT7 428 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 CMAHPQ9Y471 501 aa8.65□□□□□ -1.02
CLSTN3-203ENST00000534830 KPNA4O00629 521 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 DHHO43323 396 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 SERPINI2O75830 405 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 RGS9O75916 674 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 OR7A10O76100 309 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 OR5F1O95221 314 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 BCL10O95999 233 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 SERPINA5P05154 406 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 PATE4P0C8F1 98 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 OR8G3PP0DMU2 310 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 THRBP10828 461 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 DAOP14920 347 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 FUT1P19526 365 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 TNFRSF1BP20333 461 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 RPL18Q07020 188 aaKnown RBP8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 PIN1Q13526 163 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 RAB39AQ14964 217 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 MIDNQ504T8 468 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 ERICH5Q6P6B1 374 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 SEMA6DQ8NFY4 1073 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 PFN4Q8NHR9 129 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 TMEM255BQ8WV15 326 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 C10orf82Q8WW14 230 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 ASB10Q8WXI3 467 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 MCHR2Q969V1 340 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 CCDC134Q9H6E4 229 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 C20orf141Q9NUB4 165 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 FGFR1OP2Q9NVK5 253 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 RIMS3Q9UJD0 308 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 BAG5Q9UL15 447 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 SH3GLB1Q9Y371 365 aa8.64□□□□□ -1.03
CLSTN3-203ENST00000534830 A0A0A6YYJ9 748 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 SH3PXD2BA1X283 911 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 TMEM89A2RUT3 159 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 NPIPB13A6NJU9 1138 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 FAM220BPB1ANY3 271 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 NPIPB4C9JG80 1138 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 BLOC1S5-TXNDC5H3BN57 136 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 MRASO14807 208 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 SYNGR3O43761 229 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 MGRN1O60291 552 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 TRMUO75648 421 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 RAB36O95755 333 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 IGHG1P01857 330 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 HIST1H2ABP04908 130 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 ADRA2AP08913 450 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 MMP7P09237 267 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 QDPRP09417 244 aa8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 TROVE2P10155 538 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLSTN3-203ENST00000534830 FUT4P22083 530 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms