RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RAB1CQ92928 201 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 TMEM54Q969K7 222 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 LRRC58Q96CX6 371 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 RMND5AQ9H871 391 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 RNF121Q9H920 327 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 UNKLQ9H9P5 680 aaKnown RBP12.69□□□□□ -0.38
CTSB-230ENST00000534149 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 SELENONQ9NZV5 590 aa12.69□□□□□ -0.38
CTSB-230ENST00000534149 A0A0B4J2E0 115 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 A0A1B0GX12 115 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 ISPDA4D126 451 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 DNAJC9-AS1A6NH13 148 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 TPST1O60507 370 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 ADORA3P0DMS8 318 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 IDO1P14902 403 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 ETS2P15036 469 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 MAKP20794 623 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 PRTN3P24158 256 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 TMEM38BQ9NVV0 291 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 UBAP1Q9NZ09 502 aa12.68□□□□□ -0.38
CTSB-230ENST00000534149 TESQ9UGI8 421 aaKnown RBP12.68□□□□□ -0.38
CTSB-230ENST00000534149 TANC2Q9HCD6 1990 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 CLIC1O00299 241 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 TM9SF1O15321 606 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 FARS2O95363 451 aaKnown RBP12.67□□□□□ -0.38
CTSB-230ENST00000534149 BMP2P12643 396 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 DRD4P21917 467 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 UCP2P55851 309 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 VSNL1P62760 191 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 FADDQ13158 208 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 MELKQ14680 651 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 TBC1D28Q2M2D7 210 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 TMEM53Q6P2H8 277 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 LRFN4Q6PJG9 635 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 MSANTD1Q6ZTZ1 278 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 SLC35D2Q76EJ3 337 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 DOK3Q7L591 496 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 TREML1Q86YW5 311 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 OR4K5Q8NGD3 323 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 OR9I1Q8NGQ6 314 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 CCL17Q92583 94 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 ELMOD3Q96FG2 381 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 C1orf147Q96MC9 270 aaPredicted RBP12.67□□□□□ -0.38
CTSB-230ENST00000534149 WFDC6Q9BQY6 131 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 BCL2L14Q9BZR8 327 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 PAIP1Q9H074 479 aaKnown RBP12.67□□□□□ -0.38
CTSB-230ENST00000534149 TMEM27Q9HBJ8 222 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 TCF7L2Q9NQB0 619 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 ZNF69Q9UC07 566 aa12.67□□□□□ -0.38
CTSB-230ENST00000534149 VWFP04275 2813 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 TRPC5OSA6NMA1 111 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 HDAC3O15379 428 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 DHHO43323 396 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 SPRY3O43610 288 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 TPST2O60704 377 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 ENTPD5O75356 428 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 SNAP29O95721 258 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 IGHV1-46P01743 117 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 MT-ND5P03915 603 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 KITP10721 976 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 ZNF81P51508 661 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 POLR2JP52435 117 aaKnown RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 CDH12P55289 794 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 RGS8P57771 180 aaPredicted RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 HNRNPA0Q13151 305 aaKnown RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 MPP2Q14168 576 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 TUSC1Q2TAM9 212 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 KRT71Q3SY84 523 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 ARMCX4Q5H9R4 360 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 SLC2A7Q6PXP3 512 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 SLC16A14Q7RTX9 510 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 BCL6BQ8N143 479 aaPredicted RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 LRRC17Q8N6Y2 441 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 OR1J1Q8NGS3 322 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 OR6X1Q8NH79 312 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 GTF2H4Q92759 462 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 TAF15Q92804 592 aaKnown RBP eCLIP12.66□□□□□ -0.38
CTSB-230ENST00000534149 ZNF566Q969W8 418 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 TMEM43Q9BTV4 400 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 C1orf198Q9H425 327 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 SSU72Q9NP77 194 aaKnown RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 ZIM2Q9NZV7 527 aa12.66□□□□□ -0.38
CTSB-230ENST00000534149 LEF1Q9UJU2 399 aaPredicted RBP12.66□□□□□ -0.38
CTSB-230ENST00000534149 NOTCH1P46531 2555 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 RGS16O15492 202 aaPredicted RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 MFN2O95140 757 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 OR6A2O95222 327 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 MT-ATP6P00846 226 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 IGHV3-13P01766 116 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 HOXB9P17482 250 aaPredicted RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 BAMBIQ13145 260 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 MOGQ16653 247 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms