RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ZNF627Q7L945 461 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 NKAIN4Q8IVV8 208 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 C10orf53Q8N6V4 93 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 PRRC1Q96M27 445 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 MDFIQ99750 246 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 MAN2C1Q9NTJ4 1040 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 RHCGQ9UBD6 479 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 POMPQ9Y244 141 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 ENPP4Q9Y6X5 453 aa16.41■□□□□ 0.22
SSH3-209ENST00000532600 C11orf98E9PRG8 122 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 hCG_2039718K7EN88 272 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 AKAP8O43823 692 aaKnown RBP16.4■□□□□ 0.22
SSH3-209ENST00000532600 SERPINI2O75830 405 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 DIRAS1O95057 198 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 CH25HO95992 272 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 MT-ATP6P00846 226 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 IGFBP1P08833 259 aaPredicted RBP16.4■□□□□ 0.22
SSH3-209ENST00000532600 OR4A8P0C604 315 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 AHCYP23526 432 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 PAX7P23759 505 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 LSM11P83369 360 aaKnown RBP eCLIP16.4■□□□□ 0.22
SSH3-209ENST00000532600 LOXL1Q08397 574 aaPredicted RBP16.4■□□□□ 0.22
SSH3-209ENST00000532600 MSMPQ1L6U9 139 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 VHLLQ6RSH7 139 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 SLC46A3Q7Z3Q1 461 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 NUP37Q8NFH4 326 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 FAM168AQ92567 244 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 POLR2J2Q9GZM3 115 aaKnown RBP16.4■□□□□ 0.22
SSH3-209ENST00000532600 POLR2J3Q9H1A7 115 aaKnown RBP16.4■□□□□ 0.22
SSH3-209ENST00000532600 PLK3Q9H4B4 646 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 MEPEQ9NQ76 525 aaPredicted RBP16.4■□□□□ 0.22
SSH3-209ENST00000532600 PMF1-BGLAPU3KQ54 211 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 CUBNO60494 3623 aa16.4■□□□□ 0.22
SSH3-209ENST00000532600 ATRQ13535 2644 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 TMEM129A0AVI4 362 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 VWC2LB2RUY7 222 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 KPNA4O00629 521 aaPredicted RBP16.39■□□□□ 0.21
SSH3-209ENST00000532600 ADORA3P0DMS8 318 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 IFNGR1P15260 489 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 THBS4P35443 961 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 ARR3P36575 388 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 BIDP55957 195 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 NPRL3Q12980 569 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 EFNB3Q15768 340 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 TMEM54Q969K7 222 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 MCUR1Q96AQ8 359 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 MS4A3Q96HJ5 214 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 TNFRSF13CQ96RJ3 184 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 KCNS3Q9BQ31 491 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 YAE1D1Q9NRH1 226 aa16.39■□□□□ 0.21
SSH3-209ENST00000532600 B9A039 149 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 TLX2O43763 284 aaPredicted RBP16.38■□□□□ 0.21
SSH3-209ENST00000532600 MT-ND1P03886 318 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 ASAH2BP0C7U1 165 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 B4GALT1P15291 398 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 ERFP50548 548 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 UGT2B15P54855 530 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 SNRPD2P62316 118 aaKnown RBP16.38■□□□□ 0.21
SSH3-209ENST00000532600 ZP4Q12836 540 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 MTX3Q5HYI7 312 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 TTC33Q6PID6 262 aaPredicted RBP16.38■□□□□ 0.21
SSH3-209ENST00000532600 LRFN4Q6PJG9 635 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 ZNF813Q6ZN06 617 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 ADGRG5Q8IZF4 528 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 OFCC1Q8IZS5 231 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 OR4F15Q8NGB8 312 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 FGFBP3Q8TAT2 258 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 TMEM255BQ8WV15 326 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 SEPHS2Q99611 448 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 ZNF442Q9H7R0 627 aa16.38■□□□□ 0.21
SSH3-209ENST00000532600 MOV10Q9HCE1 1003 aaKnown RBP16.38■□□□□ 0.21
SSH3-209ENST00000532600 ZNF726A6NNF4 738 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 TP53P04637 393 aaPredicted RBP16.37■□□□□ 0.21
SSH3-209ENST00000532600 BMP4P12644 408 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 SLC25A16P16260 332 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 ZNF14P17017 642 aaPredicted RBP16.37■□□□□ 0.21
SSH3-209ENST00000532600 CAPZA2P47755 286 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 PIGFQ07326 219 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 SLC35D2Q76EJ3 337 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 CCDC36Q8IYA8 594 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 OR6N1Q8NGY5 312 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 OR6X1Q8NH79 312 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 PFN4Q8NHR9 129 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 MPP4Q96JB8 637 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 DOK1Q99704 481 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 FOXB1Q99853 325 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 ULBP2Q9BZM5 246 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 SLC19A3Q9BZV2 496 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 IL1RAPQ9NPH3 570 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 NANSQ9NR45 359 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 ZNF229Q9UJW7 825 aa16.37■□□□□ 0.21
SSH3-209ENST00000532600 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 PATE4P0C8F1 98 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 THRBP10828 461 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 CD79AP11912 226 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 ZNF35P13682 527 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 RHCEP18577 417 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 MAGEA2P43356 314 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 CSNK1A1P48729 337 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms