RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 TPK1Q9H3S4 243 aa11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 IKZF5Q9H5V7 419 aa11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 TMEM38AQ9H6F2 299 aa11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 MED29Q9NX70 200 aa11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 CMTM6Q9NX76 183 aa11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 REV1Q9UBZ9 1251 aa11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
TM9SF1-211ENST00000531406 ZNF726A6NNF4 738 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 LRRN3E7EW58 273 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 PLPP3O14495 311 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 SYNGR3O43761 229 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 GMNNO75496 209 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 HSD17B1P14061 328 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 GPX2P18283 190 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 CDH12P55289 794 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 CDH15P55291 814 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 LIPEQ05469 1076 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 PUDPQ08623 228 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 CAMK2DQ13557 499 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 SCARB2Q14108 478 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 SELPLGQ14242 412 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 ERICH5Q6P6B1 374 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 ARMC8Q8IUR7 673 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 C10orf53Q8N6V4 93 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 OR2T12Q8NG77 320 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 OR6N1Q8NGY5 312 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 OR10A6Q8NH74 314 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 TMEM43Q9BTV4 400 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 ULBP2Q9BZM5 246 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 TRIM15Q9C019 465 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 MUC13Q9H3R2 512 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 DENND2DQ9H6A0 471 aaPredicted RBP11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 KAT8Q9H7Z6 458 aaKnown RBP11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 SLC13A4Q9UKG4 626 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 SPEF1Q9Y4P9 236 aa11.03□□□□□ -0.64
TM9SF1-211ENST00000531406 ARFGEF3Q5TH69 2177 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 ANKRD65E5RJM6 399 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 H0YHG0 523 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 M0R233 179 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 SERPINB7O75635 380 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 MFN2O95140 757 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 B4GALT1P15291 398 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 AHCYP23526 432 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 AQP1P29972 269 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 GLRXP35754 106 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 GIPRP48546 466 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 GSK3BP49841 420 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 RAB1AP62820 205 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 FXNQ16595 210 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 ELFN2Q5R3F8 820 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 C1orf146Q5VVC0 180 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 UGT2A3Q6UWM9 527 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 LINC00114Q6XXX2 140 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 PXKQ7Z7A4 578 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 RANBP3LQ86VV4 465 aaPredicted RBP11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 RFLNBQ8N5W9 214 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 RNF148Q8N7C7 305 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 HIPK4Q8NE63 616 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 BHLHE22Q8NFJ8 381 aaPredicted RBP11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 ASB9Q96DX5 294 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 CLPTM1LQ96KA5 538 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 EVA1AQ9H8M9 152 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF224Q9NZL3 707 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 SLC7A8Q9UHI5 535 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 MAGEL2Q9UJ55 1249 aa11.02□□□□□ -0.65
TM9SF1-211ENST00000531406 YLPM1P49750 1951 aaKnown RBP11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 HAX1O00165 279 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 GSTA4O15217 222 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 TCF21O43680 179 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 FMO6PO60774 539 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 SERPINI2O75830 405 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 UBL3O95164 117 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 RAB36O95755 333 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 MT-ATP6P00846 226 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 ALDH3B1P43353 468 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 PTDSS1P48651 473 aaKnown RBP11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 CSNK1A1P48729 337 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 DVL1P1P54792 670 aaPredicted RBP11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 RBBP4Q09028 425 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 CCNIQ14094 377 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 PGM2L1Q6PCE3 622 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 WDR88Q6ZMY6 472 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 LRP11Q86VZ4 500 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 SLC30A8Q8IWU4 369 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 MICU2Q8IYU8 434 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 SMYD1Q8NB12 490 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 TMEM54Q969K7 222 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 LRGUKQ96M69 825 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 MCHR1Q99705 422 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 FOXB1Q99853 325 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 CD300AQ9UGN4 299 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 ANGPT4Q9Y264 503 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms