RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SYT3Q9BQG1 590 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 NANOGQ9H9S0 305 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 MEPEQ9NQ76 525 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-205ENST00000531042 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 DHHO43323 396 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 ENTPD5O75356 428 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 BCL10O95999 233 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 QDPRP09417 244 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 UMPSP11172 480 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 ALDH3B1P43353 468 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 CYLC2Q14093 348 aaPredicted RBP13.56□□□□□ -0.24
CPSF1-205ENST00000531042 ELFN2Q5R3F8 820 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 NANOGNBQ7Z5D8 188 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 LINC01356Q8N9X3 169 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 C1orf159Q96HA4 380 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 VIPAS39Q9H9C1 493 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 MYEF2Q9P2K5 600 aaKnown RBP13.56□□□□□ -0.24
CPSF1-205ENST00000531042 SLC7A8Q9UHI5 535 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 FZR1Q9UM11 496 aa13.56□□□□□ -0.24
CPSF1-205ENST00000531042 BLOC1S5-TXNDC5H3BN57 136 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 FARS2O95363 451 aaKnown RBP13.55□□□□□ -0.24
CPSF1-205ENST00000531042 HPXP02790 462 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 TCN1P20061 433 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-205ENST00000531042 LSP1P33241 339 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 SEC24CP53992 1094 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 CDH15P55291 814 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 MAD2L1BPQ15013 274 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-205ENST00000531042 HIST3H3Q16695 136 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 RABL3Q5HYI8 236 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 UGT2A3Q6UWM9 527 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 CALHM3Q86XJ0 350 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 SH3GLB1Q9Y371 365 aa13.55□□□□□ -0.24
CPSF1-205ENST00000531042 IGHG1P01857 330 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 MT-ND1P03886 318 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
CPSF1-205ENST00000531042 COL8A2P25067 703 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 CLRN1P58418 232 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 SRSF2Q01130 221 aaKnown RBP13.54□□□□□ -0.24
CPSF1-205ENST00000531042 RUNX1T1Q06455 604 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 RPL18Q07020 188 aaKnown RBP13.54□□□□□ -0.24
CPSF1-205ENST00000531042 NRN1LQ496H8 165 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 TMEM53Q6P2H8 277 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 DPPA2Q7Z7J5 298 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 CARM1Q86X55 608 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 NKAIN4Q8IVV8 208 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 PAQR4Q8N4S7 273 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-205ENST00000531042 SLC30A7Q8NEW0 376 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 OR4K5Q8NGD3 323 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 PFN4Q8NHR9 129 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 MCHR2Q969V1 340 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 LRRC58Q96CX6 371 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 ZNF347Q96SE7 839 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 SEPHS2Q99611 448 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 SH3GL1Q99961 368 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 MRPL13Q9BYD1 178 aaKnown RBP13.54□□□□□ -0.24
CPSF1-205ENST00000531042 RNF121Q9H920 327 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 DUSP13Q9UII6 198 aa13.54□□□□□ -0.24
CPSF1-205ENST00000531042 TMEFF2Q9UIK5 374 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-205ENST00000531042 A0A1W2PRG6 482 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 SLC22A23A1A5C7 686 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 FXYD1O00168 92 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 OR7A10O76100 309 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 IGF2P01344 180 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 F13BP05160 661 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 NAT2P11245 290 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 CCL2P13500 99 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 FUT1P19526 365 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 TNFRSF1BP20333 461 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 ACHEP22303 614 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 RBM34P42696 430 aaKnown RBP13.53□□□□□ -0.24
CPSF1-205ENST00000531042 UGT2B15P54855 530 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 TAS2R41P59536 307 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 MYBPC1Q00872 1141 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 CCNIQ14094 377 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 SLC36A2Q495M3 483 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 REP15Q6BDI9 236 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 RGS7BPQ6MZT1 257 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-205ENST00000531042 SLC16A14Q7RTX9 510 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 NOXO1Q8NFA2 376 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 TMEM255BQ8WV15 326 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 ASB10Q8WXI3 467 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 RDH5Q92781 318 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 C19orf24Q9BVV8 132 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
CPSF1-205ENST00000531042 POLR2J3Q9H1A7 115 aaKnown RBP13.53□□□□□ -0.24
CPSF1-205ENST00000531042 C1orf198Q9H425 327 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 BAG5Q9UL15 447 aa13.53□□□□□ -0.24
CPSF1-205ENST00000531042 ZNF346Q9UL40 294 aaKnown RBP13.53□□□□□ -0.24
CPSF1-205ENST00000531042 ANK2Q01484 3957 aa13.52□□□□□ -0.24
CPSF1-205ENST00000531042 A0A1W2PPW3 197 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 CENPBD1B2RD01 187 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 MCIDASD6RGH6 385 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 SHOX2O60902 331 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-205ENST00000531042 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
CPSF1-205ENST00000531042 OR5F1O95221 314 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 SNAP29O95721 258 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms