RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ARPC3O15145 178 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 IDH3BO43837 385 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 SDHAP31040 664 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 CEACAM16Q2WEN9 425 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 PHYHD1Q5SRE7 291 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 THEM4Q5T1C6 240 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 C9orf135Q5VTT2 229 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 ANKRD16Q6P6B7 361 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 LRFN4Q6PJG9 635 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 THSD4Q6ZMP0 1018 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 LINGO2Q7L985 606 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 FAM122BQ7Z309 247 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 TMEM179BQ7Z7N9 219 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 HIPK1Q86Z02 1210 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 WDFY1Q8IWB7 410 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 CCDC36Q8IYA8 594 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 NOXO1Q8NFA2 376 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 OR52L1Q8NGH7 329 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 ZNF519Q8TB69 540 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 MAGEE2Q8TD90 523 aaPredicted RBP13.43□□□□□ -0.26
CCS-206ENST00000530961 DNAJC9Q8WXX5 260 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 HDAC2Q92769 488 aaKnown RBP13.43□□□□□ -0.26
CCS-206ENST00000530961 RBP7Q96R05 134 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 KCNK17Q96T54 332 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 SMURF2Q9HAU4 748 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 NGBQ9NPG2 151 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 OBP2BQ9NPH6 170 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 POFUT2Q9Y2G5 429 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 ADAM18Q9Y3Q7 739 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 CSMD2Q7Z408 3487 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 AKAP9Q99996 3911 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 G3V2T6 193 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ENTPD5O75356 428 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 TXNDC12O95881 172 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 QDPRP09417 244 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 CDH2P19022 906 aaPredicted RBP13.42□□□□□ -0.26
CCS-206ENST00000530961 SSTR2P30874 369 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 HOXC12P31275 282 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ZNF133P52736 654 aaPredicted RBP13.42□□□□□ -0.26
CCS-206ENST00000530961 TAB1Q15750 504 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 C22orf34Q6ZV56 151 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ZNF627Q7L945 461 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ADCK1Q86TW2 530 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ZDHHC13Q8IUH4 622 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 SVOPLQ8N434 492 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ATG16L2Q8NAA4 619 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 SYT14Q8NB59 555 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 OR1K1Q8NGR3 316 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 BCL2L2Q92843 193 aaPredicted RBP13.42□□□□□ -0.26
CCS-206ENST00000530961 MCHR2Q969V1 340 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 SAMD8Q96LT4 415 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 Q96M85 177 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 ZNF570Q96NI8 536 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 NIPSNAP1Q9BPW8 284 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 IFT27Q9BW83 186 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 IL20RAQ9UHF4 553 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 IER3IP1Q9Y5U9 82 aa13.42□□□□□ -0.26
CCS-206ENST00000530961 PRSS37A4D1T9 235 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 H3BNX3 289 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 DHHO43323 396 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 MGRN1O60291 552 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 THBDP07204 575 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 PRKACGP22612 351 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 CRYGSP22914 178 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 ARF1P84077 181 aaKnown RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 CD47Q08722 323 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 PPA1Q15181 289 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 NRN1LQ496H8 165 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 KLHL24Q6TFL4 600 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 AMIGO2Q86SJ2 522 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 HS3ST5Q8IZT8 346 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 ZNF295-AS1Q8N0V1 137 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 NMD3Q96D46 503 aaKnown RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 ZNF837Q96EG3 531 aaPredicted RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 ZC3HAV1LQ96H79 300 aaKnown RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 ERMAPQ96PL5 475 aaPredicted RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 OSBPL10Q9BXB5 764 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 EGLN3Q9H6Z9 239 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 MOV10Q9HCE1 1003 aaKnown RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 S100A14Q9HCY8 104 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 SLC17A5Q9NRA2 495 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 BAIAP2Q9UQB8 552 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 AMDHD2Q9Y303 409 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 MAGED1Q9Y5V3 778 aaPredicted RBP13.41□□□□□ -0.26
CCS-206ENST00000530961 SLC25A15Q9Y619 301 aa13.41□□□□□ -0.26
CCS-206ENST00000530961 TEX13CA0A0J9YWL9 993 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 FAM221AA4D161 298 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 A6NNC1 897 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 WNT11O96014 354 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 NOS3P29474 1203 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 ZNF84P51523 738 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 UBE2NP61088 152 aaKnown RBP13.4□□□□□ -0.26
CCS-206ENST00000530961 KRR1Q13601 381 aaKnown RBP13.4□□□□□ -0.26
CCS-206ENST00000530961 TBRG1Q3YBR2 411 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 C10orf128Q5T292 105 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 FAHD1Q6P587 224 aa13.4□□□□□ -0.26
CCS-206ENST00000530961 KLHL17Q6TDP4 642 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms