RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 EMC8O43402 210 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SNAI2O43623 268 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TYROBPO43914 113 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 GMDSO60547 372 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 LRATO95237 230 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SERPINB2P05120 415 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NBEAP1P0C6P0 100 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 FAM228BP0C875 321 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 OCMP0CE72 109 aaPredicted RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 RD3LP0DJH9 198 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NPIPA8P0DM63 369 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SMIM10L1P0DMW3 83 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SLC2A1P11166 492 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 BCKDHAP12694 445 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 HSD17B1P14061 328 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TCP1P17987 556 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 PGCP20142 388 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 HLA-DMAP28067 261 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 PSMB5P28074 263 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 HPCAL1P37235 193 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 MAGEA6P43360 314 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 BDKRB1P46663 353 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 MEOX2P50222 304 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NOVA1P51513 510 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 MLF1P58340 268 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ADARB1P78563 741 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNF45Q02386 682 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNF85Q03923 595 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TNFRSF9Q07011 255 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NUP160Q12769 1436 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ITIH4Q14624 930 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 IRF4Q15306 451 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 LRRC36Q1X8D7 754 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TMEM249Q2WGJ8 235 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 BSXQ3C1V8 233 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNF876PQ49A33 203 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 CTSL3PQ5NE16 218 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ADAMTSL4-AS1Q5T5F5 129 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 MARC1Q5VT66 337 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 HACD4Q5VWC8 232 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 APOBEC3HQ6NTF7 200 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 LRRN1Q6UXK5 716 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 HSDL2Q6YN16 418 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ADAMTSL5Q6ZMM2 481 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 GCNT7Q6ZNI0 430 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 GDPD3Q7L5L3 318 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NUFIP2Q7Z417 695 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 HSD11B1LQ7Z5J1 315 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 CEACAM19Q7Z692 300 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 DHFR2Q86XF0 187 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 HPS6Q86YV9 775 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 DCUN1D3Q8IWE4 304 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNF100Q8IYN0 542 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 MICU2Q8IYU8 434 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 PUSL1Q8N0Z8 303 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 METTL4Q8N3J2 472 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNF561Q8N587 486 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 UBL4BQ8N7F7 174 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 CCDC71LQ8N9Z2 235 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZSCAN4Q8NAM6 433 aaPredicted RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNRF1Q8ND25 227 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 OR4C5Q8NGB2 326 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 OR4D5Q8NGN0 318 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 OR1B1Q8NGR6 318 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 FNDC8Q8TC99 324 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 MARCH1Q8TCQ1 289 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 FAM172AQ8WUF8 416 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 TMBIM1Q969X1 311 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 C11orf52Q96A22 123 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 S100PBPQ96BU1 408 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 CCDC124Q96CT7 223 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 FBXO17Q96EF6 278 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TCEAL4Q96EI5 215 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 PELI1Q96FA3 418 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SMIM10Q96HG1 83 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NEURL4Q96JN8 1562 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 GLT1D1Q96MS3 346 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TECTBQ96PL2 329 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 PPP1R2P1Q96PQ5 205 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 F2RL3Q96RI0 385 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TGS1Q96RS0 853 aaKnown RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 CCT8L2Q96SF2 557 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NIPSNAP1Q9BPW8 284 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 CENPKQ9BS16 269 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 C2orf88Q9BSF0 95 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TMEM121Q9BTD3 319 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ST6GALNAC5Q9BVH7 336 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SLC19A3Q9BZV2 496 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NMUR2Q9GZQ4 415 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SRRQ9GZT4 340 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SLITRK2Q9H156 845 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 SPNS1Q9H2V7 528 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 OR51M1Q9H341 326 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 LIME1Q9H400 295 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ELOVL6Q9H5J4 265 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 WDR54Q9H977 334 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 MCCC2Q9HCC0 563 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 CD209Q9NNX6 404 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms