RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 HSF1Q00613 529 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 RAB40BQ12829 278 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 TRAF3Q13114 568 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 GPR17Q13304 367 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 NDUFA9Q16795 377 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 DGUOKQ16854 277 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ZNF284Q2VY69 593 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 PGGHGQ32M88 737 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 CHRFAM7AQ494W8 412 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ZNF658BQ4V348 819 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 ZCWPW2Q504Y3 356 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 RFTN2Q52LD8 501 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 ACTL10Q5JWF8 245 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ANKRD26P1Q6NSI1 321 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 FAHD2BQ6P2I3 314 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 DRAM2Q6UX65 266 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 CCDC121Q6ZUS5 278 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 TSEN54Q7Z6J9 526 aaKnown RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 CALHM1Q8IU99 346 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ZNF547Q8IVP9 402 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 NAXDQ8IW45 347 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OR2L13Q8N349 312 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 RIBC1Q8N443 379 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 LRRC52Q8N7C0 313 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 GVQW1Q8N7I0 195 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ZSCAN4Q8NAM6 433 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 ACBD4Q8NC06 268 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 SLC16A11Q8NCK7 471 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 VN1R2Q8NFZ6 395 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OR7A2PQ8NGA2 310 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OR1S2Q8NGQ3 325 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OR10Z1Q8NGY1 313 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OR2V1Q8NHB1 315 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OLIG1Q8TAK6 271 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ITFG1Q8TB96 612 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 BLOC1S5Q8TDH9 187 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 NEK7Q8TDX7 302 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 TMEM255BQ8WV15 326 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 DYDC1Q8WWB3 177 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 OR8D1Q8WZ84 308 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 FAHD2AQ96GK7 314 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 NOL4LQ96MY1 436 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 CSF3RQ99062 836 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 COPS4Q9BT78 406 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 VNN3Q9NY84 501 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 VAPAQ9P0L0 249 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 TESQ9UGI8 421 aaKnown RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 LSM7Q9UK45 103 aaKnown RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 PAIP2BQ9ULR5 123 aaKnown RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
CD44-213ENST00000525209 GMPPBQ9Y5P6 360 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 TAF1P21675 1872 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 ABCB11O95342 1321 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 CCDC144AA2RUR9 1427 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 NAIPQ13075 1403 aa3.87□□□□□ -1.79
CD44-213ENST00000525209 A0A0A6YYD4 124 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 IGHV2-70DA0A0C4DH43 119 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 GLYATL1P3A0A0U1RQE8 302 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ZCWPW2A0A1B0GU75 182 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 FAM231BA6NCW3 169 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 LILRA5A6NI73 299 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 NKX6-3A6NJ46 265 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 FTCDNL1E5RQL4 147 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PLPP1O14494 284 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PRRG2O14669 202 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 HSD17B6O14756 317 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PPIHO43447 177 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 TGOLN2O43493 480 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 MPZL1O95297 269 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 DHFRP00374 187 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 FGF2P09038 288 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 FAM157CP0CG43 387 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 EGR2P11161 476 aaPredicted RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 ATP5A1P25705 553 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 ZFP36P26651 326 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 AESQ08117 197 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 RIGQ13278 110 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 GPNMBQ14956 572 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 SF3A2Q15428 464 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 TAL2Q16559 108 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 POU2AF1Q16633 256 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 DUSP7Q16829 419 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 RFX4Q33E94 735 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 BSXQ3C1V8 233 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 CCDC153Q494R4 210 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 TMEM35AQ53FP2 167 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PDZD11Q5EBL8 140 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PIK3CD-AS1Q5SR53 167 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 LPCAT4Q643R3 524 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 DUPD1Q68J44 220 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 NIPAL1Q6NVV3 410 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 LRRN1Q6UXK5 716 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 RAD9BQ6WBX8 426 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ACOT7LQ6ZUV0 252 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 FAM57BQ71RH2 274 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 C16orf82Q7Z2V1 217 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 CMC1Q7Z7K0 106 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 NT5DC3Q86UY8 548 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms