RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ZNF621Q6ZSS3 439 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MSANTD1Q6ZTZ1 278 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TRPM8Q7Z2W7 1104 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SZRD1Q7Z422 152 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RPS19BP1Q86WX3 136 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CALHM3Q86XJ0 350 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SLC34A3Q8N130 599 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RNF148Q8N7C7 305 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ANKFN1Q8N957 763 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CLEC1AQ8NC01 280 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RBM15BQ8NDT2 890 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MDS2Q8NDY4 140 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CHDHQ8NE62 594 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 C17orf47Q8NEP4 570 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OR7G1Q8NGA0 311 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OR10G3Q8NGC4 313 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OR8K3Q8NH51 312 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OR10A6Q8NH74 314 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NUBPLQ8TB37 319 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MIPOL1Q8TD10 442 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GPR151Q8TDV0 419 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GRHL3Q8TE85 626 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PAQR8Q8TEZ7 354 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 APOBEC4Q8WW27 367 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PIGTQ969N2 578 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TMBIM1Q969X1 311 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OMA1Q96E52 524 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RMND5BQ96G75 393 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ITCHQ96J02 903 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ST6GAL2Q96JF0 529 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 FER1L6-AS2Q96M78 137 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 IP6K3Q96PC2 410 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TAAR6Q96RI8 345 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SDF2Q99470 211 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ZBTB18Q99592 522 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CGREF1Q99674 301 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ASCL2Q99929 193 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NEURL2Q9BR09 285 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PELOQ9BRX2 385 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SLC25A23Q9BV35 468 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 DEFB126Q9BYW3 111 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SLC38A1Q9H2H9 487 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PIGUQ9H490 435 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 KAT8Q9H7Z6 458 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TRIM45Q9H8W5 580 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 HINT3Q9NQE9 182 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF71Q9NQZ8 489 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GIMAP4Q9NUV9 329 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GIN1Q9NXP7 522 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 STMN3Q9NZ72 180 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 LUZP4Q9P127 313 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TMEM181Q9P2C4 612 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ABCD2Q9UBJ2 740 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 COPS7AQ9UBW8 275 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 LEF1Q9UJU2 399 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MKLN1Q9UL63 735 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NTNG1Q9Y2I2 539 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CHCHD2Q9Y6H1 151 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NIPBLQ6KC79 2804 aaeCLIP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PRR14LQ5THK1 2151 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ALPK2Q86TB3 2170 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 DSPPQ9NZW4 1301 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 DIDO1Q9BTC0 2240 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OTOGQ6ZRI0 2925 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CELSR1Q9NYQ6 3014 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 USP9YO00507 2555 aaPredicted RBP2.6□□□□□ -1.99
CSDE1-208ENST00000524652 SYNDIG1LA6NDD5 238 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 OR5H15A6NDH6 313 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 PRORSD1PA6NEY8 169 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 OR6C70A6NIJ9 312 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 ENO4A6NNW6 628 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 BBIP1A8MTZ0 92 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 KIAA0513O60268 411 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 NME2P1O60361 137 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 TPST1O60507 370 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 TPST2O60704 377 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 UGT2B17O75795 530 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 BCAS2O75934 225 aaPredicted RBP2.6□□□□□ -1.99
CSDE1-208ENST00000524652 DCTN3O75935 186 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 H6PDO95479 791 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 ANP32DO95626 131 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 IGHV4-39P01824 125 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 OPN1SWP03999 348 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 BCHEP06276 602 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 ALOX5P09917 674 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 ICAM2P13598 275 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 PRG2P13727 222 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 NCK1P16333 377 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 DRD5P21918 477 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 RPS4Y1P22090 263 aaKnown RBP2.6□□□□□ -1.99
CSDE1-208ENST00000524652 PRDX6P30041 224 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 CHI3L1P36222 383 aaPredicted RBP2.6□□□□□ -1.99
CSDE1-208ENST00000524652 DCTP40126 519 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 CASP3P42574 277 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 CRATP43155 626 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 RFX3P48380 749 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 GSK3BP49841 420 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 KHKP50053 298 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 TNFSF10P50591 281 aa2.6□□□□□ -1.99
CSDE1-208ENST00000524652 HLCSP50747 726 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms