RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 RUNX1T1Q06455 604 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 YIPF5Q969M3 257 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC19A3Q9BZV2 496 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC7A8Q9UHI5 535 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 DUSP13Q9UII6 198 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 FBXL3Q9UKT7 428 aa16.11■□□□□ 0.17
PTP4A3-206ENST00000524028 FBP2O00757 339 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 NCR1O76036 304 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 CLPTM1O96005 669 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 HIST3H3Q16695 136 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 ALKBH6Q3KRA9 238 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC30A8Q8IWU4 369 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC30A7Q8NEW0 376 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 OR4K5Q8NGD3 323 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 CLDND2Q8NHS1 167 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 TSPEARQ8WU66 669 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 RDH5Q92781 318 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 MPP4Q96JB8 637 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 MAGEB18Q96M61 343 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 RACGAP1Q9H0H5 632 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 NARFLQ9H6Q4 476 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 NPHS2Q9NP85 383 aa16.1■□□□□ 0.17
PTP4A3-206ENST00000524028 BLOC1S5-TXNDC5H3BN57 136 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 BCL10O95999 233 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 HIST1H2ABP04908 130 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 FAM157BP0CG42 384 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 UMPSP11172 480 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 GPR6P46095 362 aaPredicted RBP16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 DVL1P1P54792 670 aaPredicted RBP16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 ERVS71-1P61550 626 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 MYBPC1Q00872 1141 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 VMACQ2NL98 169 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 NANOGP8Q6NSW7 305 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 HIST3H2AQ7L7L0 130 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 NKAIN4Q8IVV8 208 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 PFN4Q8NHR9 129 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 SLC26A7Q8TE54 656 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 HIST1H2ACQ93077 130 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 MCHR2Q969V1 340 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 TSPAN32Q96QS1 320 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 ZNF347Q96SE7 839 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 MRPL13Q9BYD1 178 aaKnown RBP16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 NANOGQ9H9S0 305 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 ZNF275Q9NSD4 429 aaPredicted RBP16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 TRIM33Q9UPN9 1127 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 ANK2Q01484 3957 aa16.09■□□□□ 0.17
PTP4A3-206ENST00000524028 A0A1W2PPW3 197 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 FAM157AC9JC47 383 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 EDF1O60869 148 aaKnown RBP16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 F13BP05160 661 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 TNFRSF1BP20333 461 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 ACHEP22303 614 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 SRP14P37108 136 aaKnown RBP16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 MAGEB1P43366 347 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 RPL18Q07020 188 aaKnown RBP16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 RABL3Q5HYI8 236 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 INTS11Q5TA45 600 aaKnown RBP16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 RGS7BPQ6MZT1 257 aaPredicted RBP16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 NANOGNBQ7Z5D8 188 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 TMEM255BQ8WV15 326 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 SEPHS2Q99611 448 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 OR51B6Q9H340 312 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 RNF121Q9H920 327 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.16
PTP4A3-206ENST00000524028 B4DSR2 109 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 RP2O75695 350 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 FARS2O95363 451 aaKnown RBP16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 IGHG1P01857 330 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 MT-ND1P03886 318 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 FUT1P19526 365 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 LSP1P33241 339 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 UGT2B15P54855 530 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 CLRN1P58418 232 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 LIPNQ5VXI9 398 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 TMEM53Q6P2H8 277 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 UGT2A3Q6UWM9 527 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 RINLQ6ZS11 566 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 SLC16A14Q7RTX9 510 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 CALHM3Q86XJ0 350 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 RFLNBQ8N5W9 214 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 C20orf141Q9NUB4 165 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 TREM2Q9NZC2 230 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 TAAR3PQ9P1P4 343 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 SH3GLB1Q9Y371 365 aa16.07■□□□□ 0.16
PTP4A3-206ENST00000524028 IGLV3-9A0A075B6K5 115 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 A0A0G2JND7 137 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 HMGB1P1B2RPK0 211 aaPredicted RBP16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 TCF21O43680 179 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 SHOX2O60902 331 aaPredicted RBP16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 TRMUO75648 421 aaKnown RBP16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 OR7A10O76100 309 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 MMP7P09237 267 aaPredicted RBP16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 SAGP10523 405 aaPredicted RBP16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 ZNF250P15622 560 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 ITGA2P17301 1181 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 AQP2P41181 271 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 TMEM33P57088 247 aa16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 MRPS11P82912 194 aaKnown RBP16.06■□□□□ 0.16
PTP4A3-206ENST00000524028 NKPD1Q17RQ9 610 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms