RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 AMELYQ99218 206 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 OR8D2Q9GZM6 311 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 CA10Q9NS85 328 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF69Q9UC07 566 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ING1Q9UK53 422 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-228ENST00000524023 SEC16AO15027 2179 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 FITM1A5D6W6 292 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 SHISA7A6NL88 538 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 HSPB2A8KAH6 182 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 H3BSH0 61 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 PHYHO14832 338 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 GMFGO60234 142 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 CREBL2O60519 120 aaPredicted RBP10.02□□□□□ -0.8
HDAC9-228ENST00000524023 BGLAPP02818 100 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 KIR3DL2P43630 455 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 SLC6A8P48029 635 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 PPM1FP49593 454 aaPredicted RBP10.02□□□□□ -0.8
HDAC9-228ENST00000524023 DHODHQ02127 395 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 GRK1Q15835 563 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 HSPB2Q16082 182 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF626Q68DY1 528 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 LRRC69Q6ZNQ3 347 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 GLB1L2Q8IW92 636 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 OTOSQ8NHW6 89 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 MCHR2Q969V1 340 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 ADIPOR1Q96A54 375 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 C4orf45Q96LM5 186 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 SLC38A3Q99624 504 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 GPN1Q9HCN4 374 aaPredicted RBP10.02□□□□□ -0.8
HDAC9-228ENST00000524023 PDE7BQ9NP56 450 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 KCNG2Q9UJ96 466 aa10.02□□□□□ -0.8
HDAC9-228ENST00000524023 LILRA5A6NI73 299 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 SNRPGP15A8MWD9 76 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 TMEM150CB9EJG8 249 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 H7C417 338 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 M0R233 179 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 RBBP9O75884 186 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 PDGFAP04085 211 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 IGKV3-11P04433 115 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 GIPP09681 153 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-228ENST00000524023 CXCR1P25024 350 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 PSMA6P60900 246 aaKnown RBP10.02□□□□□ -0.81
HDAC9-228ENST00000524023 TOMM34Q15785 309 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-228ENST00000524023 WDR38Q5JTN6 314 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 C1QL3Q5VWW1 255 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 ANKRD16Q6P6B7 361 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 POMZP3Q6PJE2 187 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
HDAC9-228ENST00000524023 TSLPQ969D9 159 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 DNAJA3Q96EY1 480 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 UCK1Q9HA47 277 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 MTFP1Q9UDX5 166 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 MRTO4Q9UKD2 239 aaKnown RBP10.02□□□□□ -0.81
HDAC9-228ENST00000524023 PPIEQ9UNP9 301 aaKnown RBP10.02□□□□□ -0.81
HDAC9-228ENST00000524023 MAB21L2Q9Y586 359 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 PCNX3Q9H6A9 2034 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 RP1P56715 2156 aa10.02□□□□□ -0.81
HDAC9-228ENST00000524023 LAMA1P25391 3075 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 TRAV36DV7A0A075B6V5 113 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 PLSCR5A0PG75 271 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR2M5A3KFT3 312 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 TLCD2A6NGC4 264 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 C17orf51A8MQB3 221 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 C11orf98E9PRG8 122 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 PYCARD-AS1I3L0S3 204 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 HCRTR2O43614 444 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR2A4O95047 310 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 DDAH2O95865 285 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 CFPP27918 469 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR1D4P47884 311 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 EFNB2P52799 333 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 ELOCQ15369 112 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 PCGF3Q3KNV8 242 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 FDX2Q6P4F2 183 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 Q6ZS52 159 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR51D1Q8NGF3 324 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 ZNF721Q8TF20 911 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 ATOH1Q92858 354 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR2A7Q96R45 310 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 GAL3ST4Q96RP7 486 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-228ENST00000524023 SEMA4CQ9C0C4 833 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 MMACHCQ9Y4U1 282 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 GGT3PA6NGU5 568 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 ZSCAN5BA6NJL1 495 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 XKRYO14609 159 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 CTAG2O75638 210 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 FAUP35544 74 aaKnown RBP10.01□□□□□ -0.81
HDAC9-228ENST00000524023 LTBRP36941 435 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 LBX1P52954 281 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 RAP2BP61225 183 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 SLC17A1Q14916 467 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OPCMLQ14982 345 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 CSRP2Q16527 193 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OTPQ5XKR4 325 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 TTLL10Q6ZVT0 673 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR4C16Q8NGL9 310 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms