RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	DSPP	Q9NZW4	1301 aa		6.98	□□□□□ -1.29
PTK2-253	ENST00000523805	PRORSD1P	A6NEY8	169 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	NUDT19	A8MXV4	375 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	EVPLL	A8MZ36	301 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	FAAH	O00519	579 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ACOT8	O14734	319 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	SHOX	O15266	292 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ENTPD5	O75356	428 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CRYAA	P02489	173 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	TFPT	P0C1Z6	253 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CECR9	P0C854	216 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	APEH	P13798	732 aa	Known RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	HOXB9	P17482	250 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	HOXB6	P17509	224 aa	Known RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	USF1	P22415	310 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	IGFBP5	P24593	272 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	FKBP2	P26885	142 aa	Known RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	AQP1	P29972	269 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CALCR	P30988	508 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	PDLIM4	P50479	330 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	DSCR9	P59020	149 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ARF1	P84077	181 aa	Known RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	VLDLR	P98155	873 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	LOXL1	Q08397	574 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ATR	Q13535	2644 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	C1D	Q13901	141 aa	Known RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	FXN	Q16595	210 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	RUNDC3A	Q59EK9	446 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	RNF220	Q5VTB9	566 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CYB5R2	Q6BCY4	276 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ZFP1	Q6P2D0	407 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CREB3L2	Q70SY1	520 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	COMTD1	Q86VU5	262 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	EPHX4	Q8IUS5	362 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	SVOPL	Q8N434	492 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	OR10H5	Q8NGA6	315 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	SPATA3	Q8NHX4	192 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	NFKBID	Q8NI38	313 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	KTI12	Q96EK9	354 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	JMJD8	Q96S16	334 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	KCTD14	Q9BQ13	255 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CPPED1	Q9BRF8	314 aa	Predicted RBP	6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	SPATA9	Q9BWV2	254 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	RAD21L1	Q9H4I0	556 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	RNPEPL1	Q9HAU8	725 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	AP5S1	Q9NUS5	200 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CMTM6	Q9NX76	183 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CALML5	Q9NZT1	146 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	ACTR3B	Q9P1U1	418 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	MAGEL2	Q9UJ55	1249 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	CHST2	Q9Y4C5	530 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	COL6A5	A8TX70	2615 aa		6.97	□□□□□ -1.29
PTK2-253	ENST00000523805	IGHV4-61	A0A0C4DH41	118 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	LRP5L	A4QPB2	252 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	AQP12B	A6NM10	295 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	FAM220BP	B1ANY3	271 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805		M0R3G1	203 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	LMX1B	O60663	402 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	GMNN	O75496	209 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	CSF3	P09919	207 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	OR4A8	P0C604	315 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	FAM157C	P0CG43	387 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	ZNF43	P17038	809 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	HTR2A	P28223	471 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	GRPR	P30550	384 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	SERPINF1	P36955	418 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	GSK3B	P49841	420 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	P2RY4	P51582	365 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	TXNL4A	P83876	142 aa	Known RBP	6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	NAAA	Q02083	359 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	LIPE	Q05469	1076 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	SNTB2	Q13425	540 aa	Known RBP	6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	CCNI	Q14094	377 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	RGN	Q15493	299 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	MST1L	Q2TV78	715 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	CEACAM16	Q2WEN9	425 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	MTX3	Q5HYI7	312 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	RABL3	Q5HYI8	236 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	LCN8	Q6JVE9	175 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	KRT80	Q6KB66	452 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	ERICH5	Q6P6B1	374 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	DHFR2	Q86XF0	187 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	AQP12A	Q8IXF9	295 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	MSRB3	Q8IXL7	192 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	ZCCHC24	Q8N2G6	241 aa	Known RBP	6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	C10orf111	Q8N326	155 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	GPR137C	Q8N3F9	429 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	C10orf53	Q8N6V4	93 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	TMEM158	Q8WZ71	300 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	BCL2L2	Q92843	193 aa	Predicted RBP	6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	LRGUK	Q96M69	825 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	FOXN4	Q96NZ1	517 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	ECSIT	Q9BQ95	431 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	EMC6	Q9BV81	110 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	PTDSS2	Q9BVG9	487 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	SF3B5	Q9BWJ5	86 aa	Known RBP	6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	BPESC1	Q9GZL8	116 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	NELFA	Q9H3P2	528 aa		6.96	□□□□□ -1.3
PTK2-253	ENST00000523805	TPK1	Q9H3S4	243 aa		6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms