RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 C6orf10Q5SRN2 563 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 TMEM154Q6P9G4 183 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 ZNF836Q6ZNA1 936 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 VRK2Q86Y07 508 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 GPR137CQ8N3F9 429 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 MFSD8Q8NHS3 518 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 FAM110DQ8TAY7 271 aaPredicted RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 TEX37Q96LM6 180 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 GAL3ST1Q99999 423 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 MS4A7Q9GZW8 240 aaPredicted RBP9.44□□□□□ -0.9
RNF4-218ENST00000513284 TPT1P8Q9HAU6 139 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 NPHS2Q9NP85 383 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 PNPOQ9NVS9 261 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 DCAF16Q9NXF7 216 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 UBAP1Q9NZ09 502 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 SELENONQ9NZV5 590 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 ZIM2Q9NZV7 527 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 GPR45Q9Y5Y3 372 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 DNAH3Q8TD57 4116 aa9.44□□□□□ -0.9
RNF4-218ENST00000513284 SLC22A31A6NKX4 558 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 C5orf58C9J3I9 102 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 FZD7O75084 574 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 FOXH1O75593 365 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 NDUFA7O95182 113 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 PLATP00750 562 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 FAM157BP0CG42 384 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 CCL2P13500 99 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 PRG2P13727 222 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 EPHA3P29320 983 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 SLC6A9P48067 706 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
RNF4-218ENST00000513284 NCALDP61601 193 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 RPS23P62266 143 aaKnown RBP9.43□□□□□ -0.9
RNF4-218ENST00000513284 TEKQ02763 1124 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 PAX2Q02962 417 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 FADDQ13158 208 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 C1DQ13901 141 aaKnown RBP9.43□□□□□ -0.9
RNF4-218ENST00000513284 HLXQ14774 488 aaPredicted RBP9.43□□□□□ -0.9
RNF4-218ENST00000513284 MFSD13AQ14CX5 517 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 HFEQ30201 348 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 COX20Q5RI15 118 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 ZNF362Q5T0B9 420 aaPredicted RBP9.43□□□□□ -0.9
RNF4-218ENST00000513284 SNX32Q86XE0 403 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 C20orf196Q8IYI0 205 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 ANKRD42Q8N9B4 389 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 OR4F5Q8NH21 305 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 BBS10Q8TAM1 723 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 SYNPRQ8TBG9 265 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 CCL17Q92583 94 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 UBE2FQ969M7 185 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 SLC25A36Q96CQ1 311 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 TMEM19Q96HH6 336 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 OXGR1Q96P68 337 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 C12orf10Q9HB07 376 aa9.43□□□□□ -0.9
RNF4-218ENST00000513284 AIM2O14862 343 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 PIN1P1O15428 100 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 CLPXO76031 633 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 IGHMP01871 453 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 SERPINA5P05154 406 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 VIMP08670 466 aaKnown RBP9.42□□□□□ -0.9
RNF4-218ENST00000513284 KITP10721 976 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 HLA-DOBP13765 273 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 ETFAP13804 333 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 IL12AP29459 219 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 MTNR1AP48039 350 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 STX1BP61266 288 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 GALK2Q01415 458 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 MAPK11Q15759 364 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 DEFB112Q30KQ8 113 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 FAM69AQ5T7M9 428 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 RGS7BPQ6MZT1 257 aaPredicted RBP9.42□□□□□ -0.9
RNF4-218ENST00000513284 FIP1L1Q6UN15 594 aaKnown RBP9.42□□□□□ -0.9
RNF4-218ENST00000513284 ZNF813Q6ZN06 617 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
RNF4-218ENST00000513284 SKA3Q8IX90 412 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 PIK3C3Q8NEB9 887 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 SLC38A5Q8WUX1 472 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 SLC38A4Q969I6 547 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 TIMD4Q96H15 378 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 EMC6Q9BV81 110 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 SPATA5L1Q9BVQ7 753 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
RNF4-218ENST00000513284 B3GAT2Q9NPZ5 323 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 TNFRSF19Q9NS68 423 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 NKIRAS1Q9NYS0 192 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 EGFL7Q9UHF1 273 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 SLC7A8Q9UHI5 535 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 SLC13A4Q9UKG4 626 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 CHST2Q9Y4C5 530 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 TENM3Q9P273 2699 aa9.42□□□□□ -0.9
RNF4-218ENST00000513284 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 LOC102725191A0A1B0GVB3 256 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 SRRM5B3KS81 715 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 MS4A18H0YCH9 400 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 UBDO15205 165 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 ENTPD5O75356 428 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 HPRP00739 348 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 IGHV1-46P01743 117 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 IGHV2-70P01814 119 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms