RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MRPL39Q9NYK5 338 aaKnown RBP13.6□□□□□ -0.23
CXCL1-202ENST00000509101 SELENONQ9NZV5 590 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 ISPDA4D126 451 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 DNAJC9-AS1A6NH13 148 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 C5orf58C9J3I9 102 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 PLPP3O14495 311 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 SLC22A3O75751 556 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 OR8G3PP0DMU2 310 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 PRKAR1BP31321 381 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 RGNQ15493 299 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 HFEQ30201 348 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 MIDNQ504T8 468 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 CEP85LQ5SZL2 805 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 RETREG3Q86VR2 466 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 ZNF519Q8TB69 540 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 C11orf40Q8WZ69 217 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 RAB1CQ92928 201 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 RNF121Q9H920 327 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 UBAP1Q9NZ09 502 aa13.59□□□□□ -0.23
CXCL1-202ENST00000509101 TESQ9UGI8 421 aaKnown RBP13.59□□□□□ -0.23
CXCL1-202ENST00000509101 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
CXCL1-202ENST00000509101 ADORA3P0DMS8 318 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 MAKP20794 623 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 DRD4P21917 467 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 PRTN3P24158 256 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 BST1Q10588 318 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 MELKQ14680 651 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 TBC1D28Q2M2D7 210 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 TNFAIP8L3Q5GJ75 292 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 ARMCX4Q5H9R4 360 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 BEND6Q5SZJ8 279 aaPredicted RBP13.58□□□□□ -0.24
CXCL1-202ENST00000509101 NXNQ6DKJ4 435 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 TMEM53Q6P2H8 277 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 PXKQ7Z7A4 578 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 NFKBIDQ8NI38 313 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 TMEM54Q969K7 222 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 ELMOD3Q96FG2 381 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 TMEM38BQ9NVV0 291 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 GLTPQ9NZD2 209 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 NOTCH1P46531 2555 aa13.58□□□□□ -0.24
CXCL1-202ENST00000509101 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 A0A1B0GX12 115 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 TM9SF1O15321 606 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 TPST1O60507 370 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 ENTPD5O75356 428 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 FARS2O95363 451 aaKnown RBP13.57□□□□□ -0.24
CXCL1-202ENST00000509101 SNAP29O95721 258 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 MT-ND5P03915 603 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 IDO1P14902 403 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 ETS2P15036 469 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 RGS8P57771 180 aaPredicted RBP13.57□□□□□ -0.24
CXCL1-202ENST00000509101 FADDQ13158 208 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 OR1Q1Q15612 314 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 DHRS4L2Q6PKH6 230 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 MSANTD1Q6ZTZ1 278 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 DOK3Q7L591 496 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 TREML1Q86YW5 311 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 LRRC17Q8N6Y2 441 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 OR4K5Q8NGD3 323 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 OR9I1Q8NGQ6 314 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 OR5J2Q8NH18 312 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 ST7LQ8TDW4 575 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 CCL17Q92583 94 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 LRRC58Q96CX6 371 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 BCL2L14Q9BZR8 327 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 CENPHQ9H3R5 247 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 C1orf198Q9H425 327 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 RAD21L1Q9H4I0 556 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 TMEM27Q9HBJ8 222 aa13.57□□□□□ -0.24
CXCL1-202ENST00000509101 CLIC1O00299 241 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 SPRY3O43610 288 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 OR6A2O95222 327 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 KITP10721 976 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 BMP2P12643 396 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
CXCL1-202ENST00000509101 ZNF81P51508 661 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 UCP2P55851 309 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 HNRNPA0Q13151 305 aaKnown RBP13.56□□□□□ -0.24
CXCL1-202ENST00000509101 MPP2Q14168 576 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 SLC35D2Q76EJ3 337 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 SLC16A14Q7RTX9 510 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 OR6X1Q8NH79 312 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 C1orf147Q96MC9 270 aaPredicted RBP13.56□□□□□ -0.24
CXCL1-202ENST00000509101 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 PAIP1Q9H074 479 aaKnown RBP13.56□□□□□ -0.24
CXCL1-202ENST00000509101 ZMAT3Q9HA38 289 aaKnown RBP13.56□□□□□ -0.24
CXCL1-202ENST00000509101 ZIM2Q9NZV7 527 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 ZNF69Q9UC07 566 aa13.56□□□□□ -0.24
CXCL1-202ENST00000509101 IQCMA0A1B0GVH7 501 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 TRPC5OSA6NMA1 111 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 HDAC3O15379 428 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 DHHO43323 396 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 MFN2O95140 757 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 IGHV1-46P01743 117 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 IGHV3-13P01766 116 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 POLR2JP52435 117 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms